Hb_001198_090

Information

Type -
Description -
Location Contig1198: 55868-57325
Sequence    

Annotation

kegg
ID cit:102626074
description hypothetical protein
nr
ID XP_012071311.1
description PREDICTED: uncharacterized protein LOC105633343 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L421
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04996 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001198_090 0.0 - - PREDICTED: uncharacterized protein LOC105633343 [Jatropha curcas]
2 Hb_010931_110 0.1177215752 - - ubiquitin-protein ligase, putative [Ricinus communis]
3 Hb_005529_010 0.1237557535 - - conserved hypothetical protein [Ricinus communis]
4 Hb_008453_020 0.1245983619 - - PREDICTED: E3 ubiquitin-protein ligase ATL23 [Jatropha curcas]
5 Hb_002276_190 0.1246263904 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
6 Hb_130177_010 0.1308493639 - - hypothetical protein RCOM_0897890 [Ricinus communis]
7 Hb_001427_170 0.1416932121 - - PREDICTED: 40S ribosomal protein S15a-5-like [Populus euphratica]
8 Hb_000733_060 0.1430686059 - - PREDICTED: protein GUCD1 isoform X1 [Jatropha curcas]
9 Hb_000327_210 0.1432275213 - - -
10 Hb_033080_010 0.1445626965 - - -
11 Hb_004970_200 0.1515763297 - - serine/threonine-protein kinase, putative [Ricinus communis]
12 Hb_005333_040 0.1560616495 - - PREDICTED: dnaJ homolog subfamily C member 5 [Prunus mume]
13 Hb_000768_030 0.1565010418 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
14 Hb_015456_020 0.1571127325 - - -
15 Hb_005015_010 0.1582989224 - - PREDICTED: programmed cell death protein 2-like [Jatropha curcas]
16 Hb_000175_490 0.1588771821 - - PREDICTED: probable polygalacturonase At1g80170 isoform X1 [Jatropha curcas]
17 Hb_004032_050 0.1594606739 - - hypothetical protein CISIN_1g014592mg [Citrus sinensis]
18 Hb_143629_050 0.159821566 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000352_110 0.1601979066 - - DNA topoisomerase II, putative [Ricinus communis]
20 Hb_001341_040 0.1607026216 - - hypothetical protein JCGZ_05578 [Jatropha curcas]

Gene co-expression network

sample Hb_001198_090 Hb_001198_090 Hb_010931_110 Hb_010931_110 Hb_001198_090--Hb_010931_110 Hb_005529_010 Hb_005529_010 Hb_001198_090--Hb_005529_010 Hb_008453_020 Hb_008453_020 Hb_001198_090--Hb_008453_020 Hb_002276_190 Hb_002276_190 Hb_001198_090--Hb_002276_190 Hb_130177_010 Hb_130177_010 Hb_001198_090--Hb_130177_010 Hb_001427_170 Hb_001427_170 Hb_001198_090--Hb_001427_170 Hb_010931_110--Hb_130177_010 Hb_143629_050 Hb_143629_050 Hb_010931_110--Hb_143629_050 Hb_004032_240 Hb_004032_240 Hb_010931_110--Hb_004032_240 Hb_000987_050 Hb_000987_050 Hb_010931_110--Hb_000987_050 Hb_053543_010 Hb_053543_010 Hb_010931_110--Hb_053543_010 Hb_033080_010 Hb_033080_010 Hb_005529_010--Hb_033080_010 Hb_000001_110 Hb_000001_110 Hb_005529_010--Hb_000001_110 Hb_000933_050 Hb_000933_050 Hb_005529_010--Hb_000933_050 Hb_005333_040 Hb_005333_040 Hb_005529_010--Hb_005333_040 Hb_000307_170 Hb_000307_170 Hb_005529_010--Hb_000307_170 Hb_000958_010 Hb_000958_010 Hb_008453_020--Hb_000958_010 Hb_005015_010 Hb_005015_010 Hb_008453_020--Hb_005015_010 Hb_030620_010 Hb_030620_010 Hb_008453_020--Hb_030620_010 Hb_000117_040 Hb_000117_040 Hb_008453_020--Hb_000117_040 Hb_000733_060 Hb_000733_060 Hb_008453_020--Hb_000733_060 Hb_004032_050 Hb_004032_050 Hb_002276_190--Hb_004032_050 Hb_003605_070 Hb_003605_070 Hb_002276_190--Hb_003605_070 Hb_001623_580 Hb_001623_580 Hb_002276_190--Hb_001623_580 Hb_000175_490 Hb_000175_490 Hb_002276_190--Hb_000175_490 Hb_005288_160 Hb_005288_160 Hb_002276_190--Hb_005288_160 Hb_000768_030 Hb_000768_030 Hb_002276_190--Hb_000768_030 Hb_098315_110 Hb_098315_110 Hb_130177_010--Hb_098315_110 Hb_006029_010 Hb_006029_010 Hb_130177_010--Hb_006029_010 Hb_000300_540 Hb_000300_540 Hb_130177_010--Hb_000300_540 Hb_010368_070 Hb_010368_070 Hb_130177_010--Hb_010368_070 Hb_130177_010--Hb_000987_050 Hb_011344_010 Hb_011344_010 Hb_001427_170--Hb_011344_010 Hb_004512_020 Hb_004512_020 Hb_001427_170--Hb_004512_020 Hb_182026_010 Hb_182026_010 Hb_001427_170--Hb_182026_010 Hb_005928_060 Hb_005928_060 Hb_001427_170--Hb_005928_060 Hb_012132_030 Hb_012132_030 Hb_001427_170--Hb_012132_030 Hb_017168_010 Hb_017168_010 Hb_001427_170--Hb_017168_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.01787 0.753777 1.49521 0.845416 11.8564 2.82326
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.99634 4.87624 3.55987 1.10977 0.438855

CAGE analysis