Hb_001198_160

Information

Type -
Description -
Location Contig1198: 132326-146631
Sequence    

Annotation

kegg
ID cit:102628061
description UDP-glucose flavonoid 3-O-glucosyltransferase 6-like
nr
ID AFD61601.1
description anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
swissprot
ID Q40284
description Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot esculenta GN=GT1 PE=2 SV=1
trembl
ID H9BMN5
description Anthocyanidin 3-O-glucosyltransferase OS=Hevea brasiliensis GN=ANGT1 PE=2 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05946: 141853-142103
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001198_160 0.0 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
2 Hb_000028_330 0.065482991 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
3 Hb_001610_070 0.0710367562 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
4 Hb_000836_220 0.0712176908 - - UDP-glucosyltransferase, putative [Ricinus communis]
5 Hb_177215_020 0.0782049558 - - acc synthase, putative [Ricinus communis]
6 Hb_138086_010 0.0910364052 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
7 Hb_000054_140 0.0919222604 - - PREDICTED: MACPF domain-containing protein CAD1 [Jatropha curcas]
8 Hb_006736_040 0.0963198682 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Populus euphratica]
9 Hb_011915_020 0.1038964733 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
10 Hb_002370_060 0.1070761778 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Populus euphratica]
11 Hb_024650_010 0.1122779954 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
12 Hb_002676_110 0.1162929072 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
13 Hb_004324_100 0.1177450722 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
14 Hb_029622_090 0.120036828 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
15 Hb_001663_090 0.1202421789 - - ribonuclease t2, putative [Ricinus communis]
16 Hb_033187_020 0.1207125653 - - hypothetical protein CARUB_v10004250mg, partial [Capsella rubella]
17 Hb_001518_030 0.1243900349 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
18 Hb_006573_280 0.1254199985 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
19 Hb_001247_160 0.1262490585 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
20 Hb_010721_010 0.1264053764 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]

Gene co-expression network

sample Hb_001198_160 Hb_001198_160 Hb_000028_330 Hb_000028_330 Hb_001198_160--Hb_000028_330 Hb_001610_070 Hb_001610_070 Hb_001198_160--Hb_001610_070 Hb_000836_220 Hb_000836_220 Hb_001198_160--Hb_000836_220 Hb_177215_020 Hb_177215_020 Hb_001198_160--Hb_177215_020 Hb_138086_010 Hb_138086_010 Hb_001198_160--Hb_138086_010 Hb_000054_140 Hb_000054_140 Hb_001198_160--Hb_000054_140 Hb_000028_330--Hb_001610_070 Hb_006736_040 Hb_006736_040 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_029622_090 Hb_029622_090 Hb_000028_330--Hb_029622_090 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030 Hb_011915_020 Hb_011915_020 Hb_001610_070--Hb_011915_020 Hb_001610_070--Hb_006736_040 Hb_024650_010 Hb_024650_010 Hb_001610_070--Hb_024650_010 Hb_001610_070--Hb_000836_220 Hb_002370_060 Hb_002370_060 Hb_000836_220--Hb_002370_060 Hb_000836_220--Hb_000054_140 Hb_000836_220--Hb_177215_020 Hb_006573_280 Hb_006573_280 Hb_000836_220--Hb_006573_280 Hb_000836_220--Hb_000028_330 Hb_177215_020--Hb_002370_060 Hb_177215_020--Hb_000054_140 Hb_177215_020--Hb_138086_010 Hb_028841_010 Hb_028841_010 Hb_177215_020--Hb_028841_010 Hb_008406_070 Hb_008406_070 Hb_138086_010--Hb_008406_070 Hb_009476_070 Hb_009476_070 Hb_138086_010--Hb_009476_070 Hb_000152_170 Hb_000152_170 Hb_138086_010--Hb_000152_170 Hb_070634_010 Hb_070634_010 Hb_138086_010--Hb_070634_010 Hb_000365_180 Hb_000365_180 Hb_138086_010--Hb_000365_180 Hb_000054_140--Hb_002370_060 Hb_000054_140--Hb_006573_280 Hb_004837_110 Hb_004837_110 Hb_000054_140--Hb_004837_110 Hb_033187_020 Hb_033187_020 Hb_000054_140--Hb_033187_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.43432 1.04238 1.19641 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.276737 0.27741

CAGE analysis