Hb_001199_100

Information

Type -
Description -
Location Contig1199: 163298-171644
Sequence    

Annotation

kegg
ID rcu:RCOM_0396580
description heat shock protein binding protein, putative
nr
ID XP_012079362.1
description PREDICTED: uncharacterized protein LOC105639813 [Jatropha curcas]
swissprot
ID Q9PQ82
description Chaperone protein DnaJ OS=Ureaplasma parvum serovar 3 (strain ATCC 700970) GN=dnaJ PE=3 SV=1
trembl
ID A0A067KAJ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12504 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05961: 170698-170856
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001199_100 0.0 - - PREDICTED: uncharacterized protein LOC105639813 [Jatropha curcas]
2 Hb_003253_040 0.0520238056 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
3 Hb_000343_120 0.0561957545 - - PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas]
4 Hb_000166_130 0.0585974198 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000613_050 0.0621632524 - - PREDICTED: uncharacterized protein LOC105641544 isoform X2 [Jatropha curcas]
6 Hb_009545_100 0.063271721 - - PREDICTED: protein OBERON 1 [Jatropha curcas]
7 Hb_172632_080 0.0639241903 - - PREDICTED: uncharacterized protein LOC105141138 isoform X1 [Populus euphratica]
8 Hb_003029_110 0.0677082463 - - PREDICTED: uncharacterized protein LOC105640062 isoform X1 [Jatropha curcas]
9 Hb_000183_020 0.0679390738 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 38 isoform X1 [Jatropha curcas]
10 Hb_004182_050 0.0681180055 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X2 [Jatropha curcas]
11 Hb_001341_170 0.0696751832 - - PREDICTED: general transcription factor IIH subunit 2 [Jatropha curcas]
12 Hb_005901_020 0.0700220646 - - PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1 [Jatropha curcas]
13 Hb_001195_320 0.0701447461 - - PREDICTED: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Jatropha curcas]
14 Hb_001329_140 0.0707619135 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
15 Hb_001343_040 0.0719098146 - - PREDICTED: uncharacterized protein LOC105638555 [Jatropha curcas]
16 Hb_000457_260 0.072509168 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like isoform X1 [Jatropha curcas]
17 Hb_003362_070 0.0729412149 - - PREDICTED: methyltransferase-like protein 13 [Jatropha curcas]
18 Hb_012022_090 0.0730549156 - - PREDICTED: LIMR family protein At5g01460 [Gossypium raimondii]
19 Hb_004676_010 0.0733619087 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Jatropha curcas]
20 Hb_028912_050 0.0742115452 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001199_100 Hb_001199_100 Hb_003253_040 Hb_003253_040 Hb_001199_100--Hb_003253_040 Hb_000343_120 Hb_000343_120 Hb_001199_100--Hb_000343_120 Hb_000166_130 Hb_000166_130 Hb_001199_100--Hb_000166_130 Hb_000613_050 Hb_000613_050 Hb_001199_100--Hb_000613_050 Hb_009545_100 Hb_009545_100 Hb_001199_100--Hb_009545_100 Hb_172632_080 Hb_172632_080 Hb_001199_100--Hb_172632_080 Hb_002740_110 Hb_002740_110 Hb_003253_040--Hb_002740_110 Hb_010174_110 Hb_010174_110 Hb_003253_040--Hb_010174_110 Hb_002942_100 Hb_002942_100 Hb_003253_040--Hb_002942_100 Hb_002063_020 Hb_002063_020 Hb_003253_040--Hb_002063_020 Hb_004143_130 Hb_004143_130 Hb_003253_040--Hb_004143_130 Hb_000343_120--Hb_000166_130 Hb_000035_290 Hb_000035_290 Hb_000343_120--Hb_000035_290 Hb_000028_280 Hb_000028_280 Hb_000343_120--Hb_000028_280 Hb_000343_120--Hb_009545_100 Hb_003029_110 Hb_003029_110 Hb_000343_120--Hb_003029_110 Hb_000166_130--Hb_003029_110 Hb_001195_320 Hb_001195_320 Hb_000166_130--Hb_001195_320 Hb_000166_130--Hb_000035_290 Hb_003371_110 Hb_003371_110 Hb_000166_130--Hb_003371_110 Hb_001343_040 Hb_001343_040 Hb_000613_050--Hb_001343_040 Hb_000592_030 Hb_000592_030 Hb_000613_050--Hb_000592_030 Hb_000008_290 Hb_000008_290 Hb_000613_050--Hb_000008_290 Hb_002213_070 Hb_002213_070 Hb_000613_050--Hb_002213_070 Hb_002815_030 Hb_002815_030 Hb_000613_050--Hb_002815_030 Hb_002025_020 Hb_002025_020 Hb_009545_100--Hb_002025_020 Hb_000347_070 Hb_000347_070 Hb_009545_100--Hb_000347_070 Hb_000116_500 Hb_000116_500 Hb_009545_100--Hb_000116_500 Hb_009545_100--Hb_003029_110 Hb_000225_040 Hb_000225_040 Hb_009545_100--Hb_000225_040 Hb_009218_010 Hb_009218_010 Hb_172632_080--Hb_009218_010 Hb_000072_220 Hb_000072_220 Hb_172632_080--Hb_000072_220 Hb_009548_020 Hb_009548_020 Hb_172632_080--Hb_009548_020 Hb_000457_260 Hb_000457_260 Hb_172632_080--Hb_000457_260 Hb_188063_020 Hb_188063_020 Hb_172632_080--Hb_188063_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.75919 3.04029 1.38055 2.56125 3.2843 4.50508
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.93603 2.23882 3.21023 3.3815 3.15692

CAGE analysis