Hb_001205_010

Information

Type -
Description -
Location Contig1205: 3929-9299
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001205_010 0.0 - - -
2 Hb_000313_020 0.0093036165 - - Endoplasmic reticulum vesicle transporter protein isoform 2, partial [Theobroma cacao]
3 Hb_008725_160 0.0822886441 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005686_070 0.3031718314 - - hypothetical protein RCOM_1078540 [Ricinus communis]
5 Hb_000092_160 0.3093969526 - - PREDICTED: 18 kDa seed maturation protein [Populus euphratica]
6 Hb_003041_040 0.3308403493 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
7 Hb_020763_020 0.3324879637 - - hypothetical protein POPTR_0001s27010g [Populus trichocarpa]
8 Hb_011692_030 0.3325849017 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
9 Hb_132840_040 0.3400220557 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
10 Hb_000093_070 0.3401493929 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
11 Hb_087999_010 0.3401683025 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]
12 Hb_062827_010 0.3404795309 - - -
13 Hb_009078_040 0.3445181233 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
14 Hb_156850_010 0.3470077407 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
15 Hb_004324_170 0.3603666939 - - -
16 Hb_002539_030 0.3622476452 - - PREDICTED: uncharacterized protein LOC105630961 [Jatropha curcas]
17 Hb_007545_040 0.3626261702 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
18 Hb_162189_010 0.3645943128 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
19 Hb_004102_120 0.3715182787 - - -
20 Hb_012019_040 0.3808154157 - - -

Gene co-expression network

sample Hb_001205_010 Hb_001205_010 Hb_000313_020 Hb_000313_020 Hb_001205_010--Hb_000313_020 Hb_008725_160 Hb_008725_160 Hb_001205_010--Hb_008725_160 Hb_005686_070 Hb_005686_070 Hb_001205_010--Hb_005686_070 Hb_000092_160 Hb_000092_160 Hb_001205_010--Hb_000092_160 Hb_003041_040 Hb_003041_040 Hb_001205_010--Hb_003041_040 Hb_020763_020 Hb_020763_020 Hb_001205_010--Hb_020763_020 Hb_000313_020--Hb_008725_160 Hb_000313_020--Hb_000092_160 Hb_000313_020--Hb_005686_070 Hb_000313_020--Hb_003041_040 Hb_000313_020--Hb_020763_020 Hb_008725_160--Hb_005686_070 Hb_002539_030 Hb_002539_030 Hb_008725_160--Hb_002539_030 Hb_012019_040 Hb_012019_040 Hb_008725_160--Hb_012019_040 Hb_076223_020 Hb_076223_020 Hb_008725_160--Hb_076223_020 Hb_004310_010 Hb_004310_010 Hb_005686_070--Hb_004310_010 Hb_159500_010 Hb_159500_010 Hb_005686_070--Hb_159500_010 Hb_005686_070--Hb_002539_030 Hb_001776_230 Hb_001776_230 Hb_000092_160--Hb_001776_230 Hb_000032_190 Hb_000032_190 Hb_000092_160--Hb_000032_190 Hb_000092_160--Hb_008725_160 Hb_000092_160--Hb_002539_030 Hb_003041_040--Hb_020763_020 Hb_011692_030 Hb_011692_030 Hb_003041_040--Hb_011692_030 Hb_062827_010 Hb_062827_010 Hb_003041_040--Hb_062827_010 Hb_004102_120 Hb_004102_120 Hb_003041_040--Hb_004102_120 Hb_003861_130 Hb_003861_130 Hb_003041_040--Hb_003861_130 Hb_001623_030 Hb_001623_030 Hb_003041_040--Hb_001623_030 Hb_020763_020--Hb_011692_030 Hb_020763_020--Hb_062827_010 Hb_020763_020--Hb_004102_120 Hb_020763_020--Hb_003861_130 Hb_020763_020--Hb_001623_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0212587 0.0202141 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0583839 0 0 0 0

CAGE analysis