Hb_001205_020

Information

Type -
Description -
Location Contig1205: 14881-25226
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001205_020 0.0 - - -
2 Hb_006446_070 0.1685005604 - - Zinc-binding dehydrogenase family protein [Theobroma cacao]
3 Hb_007729_010 0.1913506877 - - unnamed protein product [Vitis vinifera]
4 Hb_000614_340 0.1981169869 - - Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis]
5 Hb_000836_510 0.2146503933 - - conserved hypothetical protein [Ricinus communis]
6 Hb_006198_150 0.2236518258 - - -
7 Hb_000856_350 0.2238591267 transcription factor TF Family: WRKY WRKY transcription factor 36 [Jatropha curcas]
8 Hb_002760_030 0.2249553716 transcription factor TF Family: PLATZ hypothetical protein JCGZ_16980 [Jatropha curcas]
9 Hb_062904_010 0.2287065287 - - hypothetical protein RCOM_0725500 [Ricinus communis]
10 Hb_000976_070 0.2304850618 - - gulonolactone oxidase, putative [Ricinus communis]
11 Hb_001073_020 0.2354593884 - - hypothetical protein CISIN_1g031854mg [Citrus sinensis]
12 Hb_083377_010 0.2401144308 - - unnamed protein product [Vitis vinifera]
13 Hb_001719_030 0.2401339794 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
14 Hb_008397_020 0.2401571177 - - polyprotein [Oryza australiensis]
15 Hb_003735_010 0.2401618481 - - -
16 Hb_004918_040 0.240244093 - - conserved hypothetical protein [Ricinus communis]
17 Hb_007658_020 0.2405699063 - - Beta-amyrin synthase [Glycine soja]
18 Hb_000000_220 0.240591823 - - protein with unknown function [Ricinus communis]
19 Hb_007382_060 0.2408583309 - - -
20 Hb_004195_050 0.2408615846 - - -

Gene co-expression network

sample Hb_001205_020 Hb_001205_020 Hb_006446_070 Hb_006446_070 Hb_001205_020--Hb_006446_070 Hb_007729_010 Hb_007729_010 Hb_001205_020--Hb_007729_010 Hb_000614_340 Hb_000614_340 Hb_001205_020--Hb_000614_340 Hb_000836_510 Hb_000836_510 Hb_001205_020--Hb_000836_510 Hb_006198_150 Hb_006198_150 Hb_001205_020--Hb_006198_150 Hb_000856_350 Hb_000856_350 Hb_001205_020--Hb_000856_350 Hb_006446_070--Hb_000614_340 Hb_176138_010 Hb_176138_010 Hb_006446_070--Hb_176138_010 Hb_006810_080 Hb_006810_080 Hb_006446_070--Hb_006810_080 Hb_006124_010 Hb_006124_010 Hb_006446_070--Hb_006124_010 Hb_022693_100 Hb_022693_100 Hb_006446_070--Hb_022693_100 Hb_000866_480 Hb_000866_480 Hb_006446_070--Hb_000866_480 Hb_007729_010--Hb_000856_350 Hb_002677_010 Hb_002677_010 Hb_007729_010--Hb_002677_010 Hb_181092_010 Hb_181092_010 Hb_007729_010--Hb_181092_010 Hb_032582_010 Hb_032582_010 Hb_007729_010--Hb_032582_010 Hb_001269_020 Hb_001269_020 Hb_007729_010--Hb_001269_020 Hb_007729_010--Hb_006198_150 Hb_000526_130 Hb_000526_130 Hb_000614_340--Hb_000526_130 Hb_009230_030 Hb_009230_030 Hb_000614_340--Hb_009230_030 Hb_003724_030 Hb_003724_030 Hb_000614_340--Hb_003724_030 Hb_001504_290 Hb_001504_290 Hb_000614_340--Hb_001504_290 Hb_000614_340--Hb_000866_480 Hb_011362_020 Hb_011362_020 Hb_000836_510--Hb_011362_020 Hb_000836_510--Hb_006198_150 Hb_017987_040 Hb_017987_040 Hb_000836_510--Hb_017987_040 Hb_000836_510--Hb_000856_350 Hb_000836_510--Hb_007729_010 Hb_002005_010 Hb_002005_010 Hb_000836_510--Hb_002005_010 Hb_006198_150--Hb_017987_040 Hb_002019_030 Hb_002019_030 Hb_006198_150--Hb_002019_030 Hb_000185_060 Hb_000185_060 Hb_006198_150--Hb_000185_060 Hb_006198_150--Hb_000856_350 Hb_000856_350--Hb_181092_010 Hb_156949_010 Hb_156949_010 Hb_000856_350--Hb_156949_010 Hb_002986_110 Hb_002986_110 Hb_000856_350--Hb_002986_110 Hb_013654_010 Hb_013654_010 Hb_000856_350--Hb_013654_010 Hb_000856_350--Hb_032582_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.012694 0.126121 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0289 0 0 0.208558 0

CAGE analysis