Hb_001205_290

Information

Type transcription factor
Description TF Family: OFP
Location Contig1205: 193046-194131
Sequence    

Annotation

kegg
ID rcu:RCOM_0537060
description hypothetical protein
nr
ID XP_012073993.1
description PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
swissprot
ID Q9ZU65
description Transcription repressor OFP7 OS=Arabidopsis thaliana GN=OFP7 PE=2 SV=1
trembl
ID A0A067KW40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09498 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001205_290 0.0 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
2 Hb_001247_060 0.1040567287 - - zinc finger protein, putative [Ricinus communis]
3 Hb_012092_040 0.1048972636 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
4 Hb_000270_050 0.1124138684 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
5 Hb_002970_030 0.1125274642 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000089_090 0.1176028841 - - hypothetical protein POPTR_0019s12670g [Populus trichocarpa]
7 Hb_089140_070 0.1177869349 - - PREDICTED: uncharacterized protein LOC105637961 [Jatropha curcas]
8 Hb_001091_060 0.1247415641 - - hypothetical protein JCGZ_27062 [Jatropha curcas]
9 Hb_001052_020 0.1257292327 - - hypothetical protein JCGZ_26487 [Jatropha curcas]
10 Hb_000062_280 0.1300445565 - - plant mitotic spindle assembly checkpoint protein mad2, putative [Ricinus communis]
11 Hb_010080_050 0.1346572577 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
12 Hb_165110_010 0.1359532281 - - PREDICTED: kunitz-type elastase inhibitor BrEI-like [Jatropha curcas]
13 Hb_002307_150 0.1365759302 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
14 Hb_000962_060 0.1381883068 - - PREDICTED: uncharacterized protein LOC105646517 [Jatropha curcas]
15 Hb_005211_170 0.1390697204 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
16 Hb_012016_050 0.1414425793 - - hypothetical protein JCGZ_09036 [Jatropha curcas]
17 Hb_001141_440 0.1424708464 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
18 Hb_004319_010 0.1433838381 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
19 Hb_004598_020 0.1454304755 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
20 Hb_005916_040 0.1457397478 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]

Gene co-expression network

sample Hb_001205_290 Hb_001205_290 Hb_001247_060 Hb_001247_060 Hb_001205_290--Hb_001247_060 Hb_012092_040 Hb_012092_040 Hb_001205_290--Hb_012092_040 Hb_000270_050 Hb_000270_050 Hb_001205_290--Hb_000270_050 Hb_002970_030 Hb_002970_030 Hb_001205_290--Hb_002970_030 Hb_000089_090 Hb_000089_090 Hb_001205_290--Hb_000089_090 Hb_089140_070 Hb_089140_070 Hb_001205_290--Hb_089140_070 Hb_001247_060--Hb_000089_090 Hb_001247_060--Hb_012092_040 Hb_000035_230 Hb_000035_230 Hb_001247_060--Hb_000035_230 Hb_059502_010 Hb_059502_010 Hb_001247_060--Hb_059502_010 Hb_007304_020 Hb_007304_020 Hb_001247_060--Hb_007304_020 Hb_000531_010 Hb_000531_010 Hb_001247_060--Hb_000531_010 Hb_012092_040--Hb_000089_090 Hb_012092_040--Hb_089140_070 Hb_012092_040--Hb_000035_230 Hb_003464_010 Hb_003464_010 Hb_012092_040--Hb_003464_010 Hb_000390_010 Hb_000390_010 Hb_012092_040--Hb_000390_010 Hb_000289_020 Hb_000289_020 Hb_000270_050--Hb_000289_020 Hb_004732_070 Hb_004732_070 Hb_000270_050--Hb_004732_070 Hb_003489_010 Hb_003489_010 Hb_000270_050--Hb_003489_010 Hb_002307_150 Hb_002307_150 Hb_000270_050--Hb_002307_150 Hb_005211_170 Hb_005211_170 Hb_000270_050--Hb_005211_170 Hb_001091_060 Hb_001091_060 Hb_002970_030--Hb_001091_060 Hb_002970_030--Hb_012092_040 Hb_089040_010 Hb_089040_010 Hb_002970_030--Hb_089040_010 Hb_002970_030--Hb_002307_150 Hb_004112_080 Hb_004112_080 Hb_002970_030--Hb_004112_080 Hb_000089_090--Hb_000035_230 Hb_000089_090--Hb_059502_010 Hb_000089_090--Hb_003464_010 Hb_000962_060 Hb_000962_060 Hb_000089_090--Hb_000962_060 Hb_001971_040 Hb_001971_040 Hb_089140_070--Hb_001971_040 Hb_006810_040 Hb_006810_040 Hb_089140_070--Hb_006810_040 Hb_010080_050 Hb_010080_050 Hb_089140_070--Hb_010080_050 Hb_089140_070--Hb_000390_010 Hb_089140_070--Hb_000035_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0800495 0.176934 3.40086 5.92066 0.0388241 0.0431091
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.54915 0.0740671

CAGE analysis