Hb_001208_010

Information

Type transcription factor
Description TF Family: ERF
Location Contig1208: 19267-19569
Sequence    

Annotation

kegg
ID rcu:RCOM_0320300
description DNA binding protein, putative
nr
ID XP_012079279.1
description PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
swissprot
ID Q9FH94
description Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1
trembl
ID E6NU87
description JHL03K20.6 protein OS=Jatropha curcas GN=JHL03K20.6 PE=4 SV=1
Gene Ontology
ID GO:0005634
description ethylene-responsive transcription factor erf011

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001208_010 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
2 Hb_067793_010 0.2548299235 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
3 Hb_001124_220 0.2640349983 - - DsRNA-binding protein 5, putative isoform 1 [Theobroma cacao]
4 Hb_009732_030 0.2689222981 - - TPA: hypothetical protein ZEAMMB73_114254 [Zea mays]
5 Hb_011472_010 0.2705494115 - - PREDICTED: protein yippee-like [Jatropha curcas]
6 Hb_000920_370 0.3058070776 - - hypothetical protein JCGZ_24527 [Jatropha curcas]
7 Hb_000649_100 0.3098191703 - - unnamed protein product [Vitis vinifera]
8 Hb_001123_240 0.3111599862 - - JAZ10 [Hevea brasiliensis]
9 Hb_005306_010 0.3134240815 - - -
10 Hb_007120_040 0.3135028422 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000732_210 0.3236404151 - - hexose transporter 1 [Hevea brasiliensis]
12 Hb_002046_070 0.3245553338 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica]
13 Hb_001377_420 0.3252286535 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002835_430 0.3275315613 - - Alliin lyase precursor, putative [Ricinus communis]
15 Hb_000042_220 0.3292306619 - - PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]
16 Hb_003333_050 0.3294267866 - - hypothetical protein JCGZ_20906 [Jatropha curcas]
17 Hb_004032_260 0.3360291602 - - PREDICTED: uncharacterized protein LOC105635147 [Jatropha curcas]
18 Hb_001504_140 0.3372152316 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
19 Hb_026048_020 0.3383033754 - - PREDICTED: uncharacterized protein LOC105645738 [Jatropha curcas]
20 Hb_021576_020 0.3404085238 - - PREDICTED: uncharacterized protein LOC104426132 [Eucalyptus grandis]

Gene co-expression network

sample Hb_001208_010 Hb_001208_010 Hb_067793_010 Hb_067793_010 Hb_001208_010--Hb_067793_010 Hb_001124_220 Hb_001124_220 Hb_001208_010--Hb_001124_220 Hb_009732_030 Hb_009732_030 Hb_001208_010--Hb_009732_030 Hb_011472_010 Hb_011472_010 Hb_001208_010--Hb_011472_010 Hb_000920_370 Hb_000920_370 Hb_001208_010--Hb_000920_370 Hb_000649_100 Hb_000649_100 Hb_001208_010--Hb_000649_100 Hb_003032_100 Hb_003032_100 Hb_067793_010--Hb_003032_100 Hb_000010_410 Hb_000010_410 Hb_067793_010--Hb_000010_410 Hb_005671_020 Hb_005671_020 Hb_067793_010--Hb_005671_020 Hb_003333_050 Hb_003333_050 Hb_067793_010--Hb_003333_050 Hb_002272_280 Hb_002272_280 Hb_067793_010--Hb_002272_280 Hb_162547_010 Hb_162547_010 Hb_001124_220--Hb_162547_010 Hb_003680_190 Hb_003680_190 Hb_001124_220--Hb_003680_190 Hb_002194_090 Hb_002194_090 Hb_001124_220--Hb_002194_090 Hb_000792_090 Hb_000792_090 Hb_001124_220--Hb_000792_090 Hb_000384_110 Hb_000384_110 Hb_001124_220--Hb_000384_110 Hb_126757_010 Hb_126757_010 Hb_001124_220--Hb_126757_010 Hb_009732_030--Hb_000649_100 Hb_009732_030--Hb_067793_010 Hb_002228_060 Hb_002228_060 Hb_009732_030--Hb_002228_060 Hb_000042_220 Hb_000042_220 Hb_009732_030--Hb_000042_220 Hb_001549_030 Hb_001549_030 Hb_009732_030--Hb_001549_030 Hb_012163_020 Hb_012163_020 Hb_011472_010--Hb_012163_020 Hb_000732_210 Hb_000732_210 Hb_011472_010--Hb_000732_210 Hb_007943_190 Hb_007943_190 Hb_011472_010--Hb_007943_190 Hb_001377_420 Hb_001377_420 Hb_011472_010--Hb_001377_420 Hb_000922_120 Hb_000922_120 Hb_011472_010--Hb_000922_120 Hb_001504_140 Hb_001504_140 Hb_011472_010--Hb_001504_140 Hb_001959_130 Hb_001959_130 Hb_000920_370--Hb_001959_130 Hb_007305_030 Hb_007305_030 Hb_000920_370--Hb_007305_030 Hb_001123_210 Hb_001123_210 Hb_000920_370--Hb_001123_210 Hb_001158_190 Hb_001158_190 Hb_000920_370--Hb_001158_190 Hb_001300_260 Hb_001300_260 Hb_000920_370--Hb_001300_260 Hb_001516_020 Hb_001516_020 Hb_000920_370--Hb_001516_020 Hb_002835_430 Hb_002835_430 Hb_000649_100--Hb_002835_430 Hb_000649_100--Hb_000920_370 Hb_140902_010 Hb_140902_010 Hb_000649_100--Hb_140902_010 Hb_000649_100--Hb_002228_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.175231 0 1.08514 0.157051 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.365066 0.287496 1.64381 0.532998 0

CAGE analysis