Hb_001210_050

Information

Type -
Description -
Location Contig1210: 25813-30091
Sequence    

Annotation

kegg
ID pop:POPTR_0001s17560g
description POPTRDRAFT_548635; hypothetical protein
nr
ID KDP37160.1
description hypothetical protein JCGZ_06216 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KY20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06216 PE=4 SV=1
Gene Ontology
ID GO:0012505
description hypothetical protein JCGZ_06216

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001210_050 0.0 - - hypothetical protein JCGZ_06216 [Jatropha curcas]
2 Hb_156850_090 0.095942847 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
3 Hb_133702_020 0.1113926696 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
4 Hb_000059_230 0.117113366 - - PREDICTED: uncharacterized protein LOC105648049 [Jatropha curcas]
5 Hb_041327_020 0.1217463227 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000482_150 0.1228227709 - - PREDICTED: zinc transporter 4, chloroplastic [Jatropha curcas]
7 Hb_007810_110 0.1243523391 - - PREDICTED: DNA/RNA-binding protein KIN17 [Jatropha curcas]
8 Hb_000608_300 0.1255061917 - - PREDICTED: protein KRI1 homolog [Jatropha curcas]
9 Hb_006839_010 0.1256716033 - - PREDICTED: importin subunit beta-1-like [Jatropha curcas]
10 Hb_000365_330 0.1268928809 - - zinc finger protein, putative [Ricinus communis]
11 Hb_000358_100 0.1278406427 - - PREDICTED: uncharacterized protein LOC105633371 [Jatropha curcas]
12 Hb_022250_010 0.1286736237 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
13 Hb_005701_050 0.1303535145 - - PREDICTED: protein LTV1 homolog [Jatropha curcas]
14 Hb_002475_040 0.1303913547 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
15 Hb_000284_230 0.1308373021 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
16 Hb_001478_040 0.1318141461 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Jatropha curcas]
17 Hb_011689_030 0.1332979954 - - 80 kD MCM3-associated protein, putative [Ricinus communis]
18 Hb_002391_050 0.1333315144 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17670 [Jatropha curcas]
19 Hb_015978_100 0.1336662046 - - PREDICTED: DNA mismatch repair protein MSH6 [Jatropha curcas]
20 Hb_010407_060 0.1349577943 - - PREDICTED: probable methyltransferase PMT3 [Jatropha curcas]

Gene co-expression network

sample Hb_001210_050 Hb_001210_050 Hb_156850_090 Hb_156850_090 Hb_001210_050--Hb_156850_090 Hb_133702_020 Hb_133702_020 Hb_001210_050--Hb_133702_020 Hb_000059_230 Hb_000059_230 Hb_001210_050--Hb_000059_230 Hb_041327_020 Hb_041327_020 Hb_001210_050--Hb_041327_020 Hb_000482_150 Hb_000482_150 Hb_001210_050--Hb_000482_150 Hb_007810_110 Hb_007810_110 Hb_001210_050--Hb_007810_110 Hb_002475_040 Hb_002475_040 Hb_156850_090--Hb_002475_040 Hb_001935_160 Hb_001935_160 Hb_156850_090--Hb_001935_160 Hb_001008_050 Hb_001008_050 Hb_156850_090--Hb_001008_050 Hb_000181_100 Hb_000181_100 Hb_156850_090--Hb_000181_100 Hb_158092_080 Hb_158092_080 Hb_156850_090--Hb_158092_080 Hb_000562_050 Hb_000562_050 Hb_156850_090--Hb_000562_050 Hb_012055_110 Hb_012055_110 Hb_133702_020--Hb_012055_110 Hb_000066_150 Hb_000066_150 Hb_133702_020--Hb_000066_150 Hb_133702_020--Hb_000059_230 Hb_003124_160 Hb_003124_160 Hb_133702_020--Hb_003124_160 Hb_002007_110 Hb_002007_110 Hb_133702_020--Hb_002007_110 Hb_003805_040 Hb_003805_040 Hb_133702_020--Hb_003805_040 Hb_006839_010 Hb_006839_010 Hb_000059_230--Hb_006839_010 Hb_009288_020 Hb_009288_020 Hb_000059_230--Hb_009288_020 Hb_000684_350 Hb_000684_350 Hb_000059_230--Hb_000684_350 Hb_001377_100 Hb_001377_100 Hb_000059_230--Hb_001377_100 Hb_000059_230--Hb_012055_110 Hb_003040_050 Hb_003040_050 Hb_000059_230--Hb_003040_050 Hb_005496_050 Hb_005496_050 Hb_041327_020--Hb_005496_050 Hb_098209_010 Hb_098209_010 Hb_041327_020--Hb_098209_010 Hb_132840_110 Hb_132840_110 Hb_041327_020--Hb_132840_110 Hb_001619_050 Hb_001619_050 Hb_041327_020--Hb_001619_050 Hb_000320_470 Hb_000320_470 Hb_041327_020--Hb_000320_470 Hb_000445_140 Hb_000445_140 Hb_041327_020--Hb_000445_140 Hb_006355_020 Hb_006355_020 Hb_000482_150--Hb_006355_020 Hb_000183_050 Hb_000183_050 Hb_000482_150--Hb_000183_050 Hb_000284_230 Hb_000284_230 Hb_000482_150--Hb_000284_230 Hb_003417_010 Hb_003417_010 Hb_000482_150--Hb_003417_010 Hb_119600_050 Hb_119600_050 Hb_000482_150--Hb_119600_050 Hb_031042_050 Hb_031042_050 Hb_007810_110--Hb_031042_050 Hb_008253_020 Hb_008253_020 Hb_007810_110--Hb_008253_020 Hb_004129_070 Hb_004129_070 Hb_007810_110--Hb_004129_070 Hb_001279_120 Hb_001279_120 Hb_007810_110--Hb_001279_120 Hb_002276_240 Hb_002276_240 Hb_007810_110--Hb_002276_240 Hb_159558_010 Hb_159558_010 Hb_007810_110--Hb_159558_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.290647 0.300073 0.175199 0.330978 0.284953 0.140207
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0434497 0.136752 0.12978 0.19036 0.397778

CAGE analysis