Hb_001221_010

Information

Type -
Description -
Location Contig1221: 1-4107
Sequence    

Annotation

kegg
ID rcu:RCOM_1506810
description hypothetical protein
nr
ID XP_002511216.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID B9RAJ1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506810 PE=4 SV=1
Gene Ontology
ID GO:0003824
description o-fucosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000364_110 0.3246273641 - - hypothetical protein PRUPE_ppa016620mg [Prunus persica]
3 Hb_149731_010 0.3438071495 - - -
4 Hb_152439_010 0.349725251 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
5 Hb_000025_130 0.356714544 - - -
6 Hb_156635_050 0.3578660523 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
7 Hb_000181_040 0.3659109326 transcription factor TF Family: NAC PREDICTED: protein CUP-SHAPED COTYLEDON 2 [Jatropha curcas]
8 Hb_030736_110 0.3762512365 - - -
9 Hb_003666_010 0.380400935 - - hypothetical protein JCGZ_12303 [Jatropha curcas]
10 Hb_003554_020 0.3818890724 - - hypothetical protein JCGZ_14833 [Jatropha curcas]
11 Hb_010815_050 0.3823696269 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
12 Hb_000123_250 0.3874439589 - - PREDICTED: protein UPSTREAM OF FLC-like [Jatropha curcas]
13 Hb_002391_090 0.3957682742 - - PREDICTED: IST1-like protein [Jatropha curcas]
14 Hb_005269_030 0.400573922 - - cysteine protease, putative [Ricinus communis]
15 Hb_005803_020 0.4064027265 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
16 Hb_103494_010 0.4077163228 - - -
17 Hb_004453_010 0.4086562967 - - conserved hypothetical protein [Ricinus communis]
18 Hb_009780_090 0.4178329058 - - PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Jatropha curcas]
19 Hb_004375_070 0.4222601637 - - PREDICTED: proline-rich protein 1-like [Jatropha curcas]
20 Hb_151939_010 0.4292660855 - - PREDICTED: far upstream element-binding protein 2 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_001221_010 Hb_001221_010 Hb_000364_110 Hb_000364_110 Hb_001221_010--Hb_000364_110 Hb_149731_010 Hb_149731_010 Hb_001221_010--Hb_149731_010 Hb_152439_010 Hb_152439_010 Hb_001221_010--Hb_152439_010 Hb_000025_130 Hb_000025_130 Hb_001221_010--Hb_000025_130 Hb_156635_050 Hb_156635_050 Hb_001221_010--Hb_156635_050 Hb_000181_040 Hb_000181_040 Hb_001221_010--Hb_000181_040 Hb_000364_110--Hb_152439_010 Hb_030736_110 Hb_030736_110 Hb_000364_110--Hb_030736_110 Hb_005803_020 Hb_005803_020 Hb_000364_110--Hb_005803_020 Hb_003772_040 Hb_003772_040 Hb_000364_110--Hb_003772_040 Hb_002240_100 Hb_002240_100 Hb_000364_110--Hb_002240_100 Hb_000088_030 Hb_000088_030 Hb_149731_010--Hb_000088_030 Hb_000236_270 Hb_000236_270 Hb_149731_010--Hb_000236_270 Hb_010603_030 Hb_010603_030 Hb_149731_010--Hb_010603_030 Hb_149731_010--Hb_000181_040 Hb_000038_150 Hb_000038_150 Hb_149731_010--Hb_000038_150 Hb_074152_010 Hb_074152_010 Hb_149731_010--Hb_074152_010 Hb_003847_010 Hb_003847_010 Hb_152439_010--Hb_003847_010 Hb_000174_280 Hb_000174_280 Hb_152439_010--Hb_000174_280 Hb_152439_010--Hb_002240_100 Hb_001226_080 Hb_001226_080 Hb_152439_010--Hb_001226_080 Hb_001524_100 Hb_001524_100 Hb_152439_010--Hb_001524_100 Hb_010815_050 Hb_010815_050 Hb_000025_130--Hb_010815_050 Hb_000573_030 Hb_000573_030 Hb_000025_130--Hb_000573_030 Hb_000252_140 Hb_000252_140 Hb_000025_130--Hb_000252_140 Hb_007044_150 Hb_007044_150 Hb_000025_130--Hb_007044_150 Hb_001377_390 Hb_001377_390 Hb_000025_130--Hb_001377_390 Hb_069868_010 Hb_069868_010 Hb_000025_130--Hb_069868_010 Hb_000330_180 Hb_000330_180 Hb_156635_050--Hb_000330_180 Hb_003554_020 Hb_003554_020 Hb_156635_050--Hb_003554_020 Hb_007524_050 Hb_007524_050 Hb_156635_050--Hb_007524_050 Hb_007189_020 Hb_007189_020 Hb_156635_050--Hb_007189_020 Hb_156635_050--Hb_000181_040 Hb_000181_040--Hb_007189_020 Hb_000181_040--Hb_000236_270 Hb_058884_010 Hb_058884_010 Hb_000181_040--Hb_058884_010 Hb_000917_250 Hb_000917_250 Hb_000181_040--Hb_000917_250 Hb_155932_010 Hb_155932_010 Hb_000181_040--Hb_155932_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0799864 0 0.101641 0.135887
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0956994 0 0.0791555 0

CAGE analysis