Hb_001221_020

Information

Type -
Description -
Location Contig1221: 5045-9647
Sequence    

Annotation

kegg
ID pop:POPTR_0015s10480g
description POPTRDRAFT_835204; aspartyl aminopeptidase family protein
nr
ID XP_012079871.1
description PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
swissprot
ID B9RAJ0
description Probable aspartyl aminopeptidase OS=Ricinus communis GN=RCOM_1506700 PE=2 SV=2
trembl
ID A0A067KFA5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11321 PE=3 SV=1
Gene Ontology
ID GO:0005774
description probable aspartyl aminopeptidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06696: 5534-9763
cDNA
(Sanger)
(ID:Location)		 007_N06.ab1: 5547-7201 , 052_A15.ab1: 5547-6966

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_020 0.0 - - PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
2 Hb_004880_150 0.0585345218 - - PREDICTED: uncharacterized protein LOC105632834 [Jatropha curcas]
3 Hb_000841_050 0.0768346827 - - hypothetical protein L484_019972 [Morus notabilis]
4 Hb_000025_190 0.0816353168 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
5 Hb_005648_010 0.0826109591 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]
6 Hb_003776_060 0.0830408483 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
7 Hb_001493_150 0.0837646528 - - PREDICTED: alanine aminotransferase 2-like [Jatropha curcas]
8 Hb_000327_250 0.0843393712 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
9 Hb_001104_230 0.0859514755 - - PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
10 Hb_042474_010 0.0867935766 - - PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Jatropha curcas]
11 Hb_002477_290 0.0868247701 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like [Jatropha curcas]
12 Hb_016347_010 0.0895590935 - - protein transporter, putative [Ricinus communis]
13 Hb_000144_120 0.091397428 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_007441_280 0.0920402066 - - hypothetical protein JCGZ_14672 [Jatropha curcas]
15 Hb_000159_120 0.0926080938 - - PREDICTED: uncharacterized protein LOC105632857 [Jatropha curcas]
16 Hb_000367_090 0.092911653 - - PREDICTED: plant intracellular Ras-group-related LRR protein 7 [Jatropha curcas]
17 Hb_002811_100 0.0938832489 - - PREDICTED: uncharacterized protein LOC105647658 [Jatropha curcas]
18 Hb_000190_090 0.0942967477 - - PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]
19 Hb_004096_110 0.0979266973 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]
20 Hb_003544_030 0.1006809417 - - PREDICTED: citrate synthase, glyoxysomal [Jatropha curcas]

Gene co-expression network

sample Hb_001221_020 Hb_001221_020 Hb_004880_150 Hb_004880_150 Hb_001221_020--Hb_004880_150 Hb_000841_050 Hb_000841_050 Hb_001221_020--Hb_000841_050 Hb_000025_190 Hb_000025_190 Hb_001221_020--Hb_000025_190 Hb_005648_010 Hb_005648_010 Hb_001221_020--Hb_005648_010 Hb_003776_060 Hb_003776_060 Hb_001221_020--Hb_003776_060 Hb_001493_150 Hb_001493_150 Hb_001221_020--Hb_001493_150 Hb_004880_150--Hb_003776_060 Hb_002477_290 Hb_002477_290 Hb_004880_150--Hb_002477_290 Hb_002811_100 Hb_002811_100 Hb_004880_150--Hb_002811_100 Hb_004880_150--Hb_000025_190 Hb_004880_150--Hb_005648_010 Hb_012393_030 Hb_012393_030 Hb_000841_050--Hb_012393_030 Hb_000841_050--Hb_002477_290 Hb_000841_050--Hb_004880_150 Hb_000663_060 Hb_000663_060 Hb_000841_050--Hb_000663_060 Hb_001269_130 Hb_001269_130 Hb_000841_050--Hb_001269_130 Hb_062537_010 Hb_062537_010 Hb_000025_190--Hb_062537_010 Hb_002660_170 Hb_002660_170 Hb_000025_190--Hb_002660_170 Hb_000025_190--Hb_005648_010 Hb_003988_050 Hb_003988_050 Hb_000025_190--Hb_003988_050 Hb_000115_150 Hb_000115_150 Hb_000025_190--Hb_000115_150 Hb_002093_060 Hb_002093_060 Hb_005648_010--Hb_002093_060 Hb_002357_060 Hb_002357_060 Hb_005648_010--Hb_002357_060 Hb_005648_010--Hb_000115_150 Hb_000120_370 Hb_000120_370 Hb_005648_010--Hb_000120_370 Hb_003776_060--Hb_002811_100 Hb_000327_250 Hb_000327_250 Hb_003776_060--Hb_000327_250 Hb_003544_030 Hb_003544_030 Hb_003776_060--Hb_003544_030 Hb_023001_040 Hb_023001_040 Hb_003776_060--Hb_023001_040 Hb_009615_060 Hb_009615_060 Hb_001493_150--Hb_009615_060 Hb_002301_100 Hb_002301_100 Hb_001493_150--Hb_002301_100 Hb_001493_150--Hb_012393_030 Hb_001493_150--Hb_005648_010 Hb_021576_010 Hb_021576_010 Hb_001493_150--Hb_021576_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.30668 6.31505 7.64874 13.5019 4.15439 5.12509
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.59357 7.97794 7.65144 17.1192 7.78475

CAGE analysis