Hb_001221_440

Information

Type -
Description -
Location Contig1221: 300075-306734
Sequence    

Annotation

kegg
ID rcu:RCOM_1505590
description DNA damage tolerance protein rad31, putative
nr
ID XP_012090667.1
description PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X1 [Jatropha curcas]
swissprot
ID Q8VY78
description SUMO-activating enzyme subunit 1A OS=Arabidopsis thaliana GN=SAE1A PE=1 SV=1
trembl
ID A0A067JIE4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26429 PE=4 SV=1
Gene Ontology
ID GO:0008641
description sumo-activating enzyme subunit 1b-1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06758: 300075-306670 , PASA_asmbl_06760: 304403-306615
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_440 0.0 - - PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X1 [Jatropha curcas]
2 Hb_000111_170 0.06389163 - - PREDICTED: uncharacterized protein LOC105631234 isoform X1 [Jatropha curcas]
3 Hb_065525_080 0.0684168565 - - PREDICTED: ubiquitin-conjugating enzyme E2 14 [Populus euphratica]
4 Hb_000019_190 0.0687635437 - - hypothetical protein POPTR_0002s23900g [Populus trichocarpa]
5 Hb_001635_110 0.0689155823 - - PREDICTED: NADP-specific glutamate dehydrogenase [Jatropha curcas]
6 Hb_171900_090 0.0689214098 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002014_010 0.0692508141 - - Uncharacterized protein isoform 1 [Theobroma cacao]
8 Hb_178968_060 0.071366461 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
9 Hb_183433_010 0.0720893508 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
10 Hb_029695_080 0.0734319683 - - PREDICTED: NAD-dependent protein deacetylase SRT1 [Prunus mume]
11 Hb_000176_020 0.0777639272 - - PREDICTED: nuclear pore complex protein NUP43 [Jatropha curcas]
12 Hb_000230_460 0.0803518115 - - Speckle-type POZ protein, putative [Ricinus communis]
13 Hb_001623_270 0.0804262904 transcription factor TF Family: PHD Inhibitor of growth protein, putative [Ricinus communis]
14 Hb_003098_070 0.0814953018 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
15 Hb_008304_020 0.0817464246 - - PREDICTED: ATP-dependent RNA helicase DBP2-like [Jatropha curcas]
16 Hb_030414_040 0.0817944014 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]
17 Hb_002876_300 0.0818759728 - - PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Jatropha curcas]
18 Hb_000803_270 0.0833622018 - - PREDICTED: nuclear cap-binding protein subunit 1 [Jatropha curcas]
19 Hb_163175_010 0.0857143374 - - hypothetical protein CISIN_1g036035mg, partial [Citrus sinensis]
20 Hb_000365_230 0.0859113028 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]

Gene co-expression network

sample Hb_001221_440 Hb_001221_440 Hb_000111_170 Hb_000111_170 Hb_001221_440--Hb_000111_170 Hb_065525_080 Hb_065525_080 Hb_001221_440--Hb_065525_080 Hb_000019_190 Hb_000019_190 Hb_001221_440--Hb_000019_190 Hb_001635_110 Hb_001635_110 Hb_001221_440--Hb_001635_110 Hb_171900_090 Hb_171900_090 Hb_001221_440--Hb_171900_090 Hb_002014_010 Hb_002014_010 Hb_001221_440--Hb_002014_010 Hb_000085_210 Hb_000085_210 Hb_000111_170--Hb_000085_210 Hb_000363_310 Hb_000363_310 Hb_000111_170--Hb_000363_310 Hb_030414_040 Hb_030414_040 Hb_000111_170--Hb_030414_040 Hb_005288_070 Hb_005288_070 Hb_000111_170--Hb_005288_070 Hb_183433_010 Hb_183433_010 Hb_000111_170--Hb_183433_010 Hb_093666_010 Hb_093666_010 Hb_065525_080--Hb_093666_010 Hb_113853_010 Hb_113853_010 Hb_065525_080--Hb_113853_010 Hb_001623_270 Hb_001623_270 Hb_065525_080--Hb_001623_270 Hb_000375_390 Hb_000375_390 Hb_065525_080--Hb_000375_390 Hb_065525_080--Hb_183433_010 Hb_023313_040 Hb_023313_040 Hb_000019_190--Hb_023313_040 Hb_000019_190--Hb_002014_010 Hb_001227_120 Hb_001227_120 Hb_000019_190--Hb_001227_120 Hb_007007_040 Hb_007007_040 Hb_000019_190--Hb_007007_040 Hb_007248_030 Hb_007248_030 Hb_000019_190--Hb_007248_030 Hb_163175_010 Hb_163175_010 Hb_000019_190--Hb_163175_010 Hb_178968_060 Hb_178968_060 Hb_001635_110--Hb_178968_060 Hb_008304_020 Hb_008304_020 Hb_001635_110--Hb_008304_020 Hb_000173_190 Hb_000173_190 Hb_001635_110--Hb_000173_190 Hb_001300_280 Hb_001300_280 Hb_001635_110--Hb_001300_280 Hb_006189_020 Hb_006189_020 Hb_001635_110--Hb_006189_020 Hb_003098_070 Hb_003098_070 Hb_001635_110--Hb_003098_070 Hb_000789_320 Hb_000789_320 Hb_171900_090--Hb_000789_320 Hb_164390_010 Hb_164390_010 Hb_171900_090--Hb_164390_010 Hb_171900_090--Hb_183433_010 Hb_002272_050 Hb_002272_050 Hb_171900_090--Hb_002272_050 Hb_000176_020 Hb_000176_020 Hb_171900_090--Hb_000176_020 Hb_001025_090 Hb_001025_090 Hb_171900_090--Hb_001025_090 Hb_002014_010--Hb_007248_030 Hb_004109_320 Hb_004109_320 Hb_002014_010--Hb_004109_320 Hb_002014_010--Hb_171900_090 Hb_000702_090 Hb_000702_090 Hb_002014_010--Hb_000702_090 Hb_000365_230 Hb_000365_230 Hb_002014_010--Hb_000365_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.79215 17.1071 29.3711 19.7697 12.9968 12.2309
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0506 19.0109 7.23006 17.1678 19.2224

CAGE analysis