Hb_001227_070

Information

Type -
Description -
Location Contig1227: 128885-133920
Sequence    

Annotation

kegg
ID tcc:TCM_022423
description Nucleotide-diphospho-sugar transferases superfamily protein isoform 1
nr
ID XP_012066505.1
description PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
swissprot
ID Q9LZR3
description Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1
trembl
ID A0A067LFA8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23699 PE=4 SV=1
Gene Ontology
ID GO:0047259
description glucomannan 4-beta-mannosyltransferase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06903: 128753-133946
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001227_070 0.0 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
2 Hb_000879_170 0.1396862038 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
3 Hb_119044_010 0.1425669497 - - PREDICTED: stomatal closure-related actin-binding protein 2-like [Jatropha curcas]
4 Hb_000748_120 0.1458392957 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL1 [Jatropha curcas]
5 Hb_001544_050 0.1461623781 - - PREDICTED: U-box domain-containing protein 11-like [Jatropha curcas]
6 Hb_001180_010 0.1615387047 - - PREDICTED: glucan endo-1,3-beta-glucosidase 9 [Jatropha curcas]
7 Hb_147378_010 0.1642579446 - - -
8 Hb_000856_400 0.1643770615 - - PREDICTED: protein IQ-DOMAIN 31-like [Jatropha curcas]
9 Hb_001017_130 0.1664939562 - - hypothetical protein POPTR_0010s06070g [Populus trichocarpa]
10 Hb_000390_210 0.1678486058 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
11 Hb_001729_030 0.1718119827 - - hypothetical protein VITISV_044457 [Vitis vinifera]
12 Hb_000932_050 0.1753201369 - - annexin [Manihot esculenta]
13 Hb_001491_020 0.1773029357 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
14 Hb_005144_120 0.1796266878 - - PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
15 Hb_143004_020 0.1797056067 - - PREDICTED: phosphopantothenate--cysteine ligase 2-like [Jatropha curcas]
16 Hb_000465_410 0.1798784526 - - conserved hypothetical protein [Ricinus communis]
17 Hb_019654_180 0.1800859864 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
18 Hb_000328_010 0.1812005455 - - PREDICTED: QWRF motif-containing protein 8-like [Jatropha curcas]
19 Hb_041692_010 0.1819094696 - - annexin [Manihot esculenta]
20 Hb_001817_040 0.1819662795 - - myosin XI, putative [Ricinus communis]

Gene co-expression network

sample Hb_001227_070 Hb_001227_070 Hb_000879_170 Hb_000879_170 Hb_001227_070--Hb_000879_170 Hb_119044_010 Hb_119044_010 Hb_001227_070--Hb_119044_010 Hb_000748_120 Hb_000748_120 Hb_001227_070--Hb_000748_120 Hb_001544_050 Hb_001544_050 Hb_001227_070--Hb_001544_050 Hb_001180_010 Hb_001180_010 Hb_001227_070--Hb_001180_010 Hb_147378_010 Hb_147378_010 Hb_001227_070--Hb_147378_010 Hb_000853_180 Hb_000853_180 Hb_000879_170--Hb_000853_180 Hb_028487_060 Hb_028487_060 Hb_000879_170--Hb_028487_060 Hb_000856_400 Hb_000856_400 Hb_000879_170--Hb_000856_400 Hb_000012_330 Hb_000012_330 Hb_000879_170--Hb_000012_330 Hb_001357_050 Hb_001357_050 Hb_000879_170--Hb_001357_050 Hb_002028_180 Hb_002028_180 Hb_119044_010--Hb_002028_180 Hb_002817_040 Hb_002817_040 Hb_119044_010--Hb_002817_040 Hb_119044_010--Hb_001544_050 Hb_001017_130 Hb_001017_130 Hb_119044_010--Hb_001017_130 Hb_000984_150 Hb_000984_150 Hb_119044_010--Hb_000984_150 Hb_051663_010 Hb_051663_010 Hb_000748_120--Hb_051663_010 Hb_041692_010 Hb_041692_010 Hb_000748_120--Hb_041692_010 Hb_000847_130 Hb_000847_130 Hb_000748_120--Hb_000847_130 Hb_005976_110 Hb_005976_110 Hb_000748_120--Hb_005976_110 Hb_007617_010 Hb_007617_010 Hb_000748_120--Hb_007617_010 Hb_001817_040 Hb_001817_040 Hb_000748_120--Hb_001817_040 Hb_001544_050--Hb_001180_010 Hb_000390_210 Hb_000390_210 Hb_001544_050--Hb_000390_210 Hb_000465_410 Hb_000465_410 Hb_001544_050--Hb_000465_410 Hb_002701_070 Hb_002701_070 Hb_001544_050--Hb_002701_070 Hb_000749_260 Hb_000749_260 Hb_001544_050--Hb_000749_260 Hb_004994_330 Hb_004994_330 Hb_001544_050--Hb_004994_330 Hb_000076_030 Hb_000076_030 Hb_001180_010--Hb_000076_030 Hb_001180_010--Hb_004994_330 Hb_048476_140 Hb_048476_140 Hb_001180_010--Hb_048476_140 Hb_001180_010--Hb_000465_410 Hb_001180_010--Hb_002701_070 Hb_147378_010--Hb_000390_210 Hb_147378_010--Hb_000749_260 Hb_147378_010--Hb_001544_050 Hb_004650_050 Hb_004650_050 Hb_147378_010--Hb_004650_050 Hb_008053_030 Hb_008053_030 Hb_147378_010--Hb_008053_030 Hb_147378_010--Hb_000465_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.27841 1.36249 31.3775 34.7856 0.845327 0.177327
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.75945 1.4625 3.94736 1.0563 30.4021

CAGE analysis