Hb_001232_040

Information

Type -
Description -
Location Contig1232: 19087-20442
Sequence    

Annotation

kegg
ID rcu:RCOM_1495210
description hypothetical protein
nr
ID XP_012073338.1
description PREDICTED: uncharacterized protein LOC105634974 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMA7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06268 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001232_040 0.0 - - PREDICTED: uncharacterized protein LOC105634974 [Jatropha curcas]
2 Hb_001158_250 0.079508287 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000622_030 0.0810074499 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
4 Hb_000271_130 0.0978521925 transcription factor TF Family: C2C2-Dof DNA binding with one finger 2.4, putative [Theobroma cacao]
5 Hb_000000_290 0.09944341 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [Jatropha curcas]
6 Hb_001950_100 0.1008664853 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
7 Hb_005723_090 0.1096192593 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005790_010 0.1124470259 - - hypothetical protein POPTR_0004s24080g [Populus trichocarpa]
9 Hb_005725_160 0.113848835 - - PREDICTED: uncharacterized protein LOC105630811 [Jatropha curcas]
10 Hb_005183_100 0.1177964106 - - hypothetical protein CICLE_v10002898mg [Citrus clementina]
11 Hb_001305_020 0.1216900946 - - PREDICTED: uncharacterized protein LOC102623247 [Citrus sinensis]
12 Hb_000120_480 0.1223860156 - - -
13 Hb_002785_010 0.1239169948 transcription factor TF Family: MYB PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
14 Hb_000347_320 0.124771631 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
15 Hb_000023_180 0.1285740436 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
16 Hb_006355_060 0.1293631899 - - PREDICTED: transcription factor PIF1-like isoform X2 [Jatropha curcas]
17 Hb_019925_020 0.1303060586 - - electron carrier, putative [Ricinus communis]
18 Hb_002168_070 0.1305040219 - - Jasmonate O-methyltransferase, putative [Ricinus communis]
19 Hb_003050_330 0.1315268413 - - hypothetical protein JCGZ_04591 [Jatropha curcas]
20 Hb_163950_050 0.1354710512 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001232_040 Hb_001232_040 Hb_001158_250 Hb_001158_250 Hb_001232_040--Hb_001158_250 Hb_000622_030 Hb_000622_030 Hb_001232_040--Hb_000622_030 Hb_000271_130 Hb_000271_130 Hb_001232_040--Hb_000271_130 Hb_000000_290 Hb_000000_290 Hb_001232_040--Hb_000000_290 Hb_001950_100 Hb_001950_100 Hb_001232_040--Hb_001950_100 Hb_005723_090 Hb_005723_090 Hb_001232_040--Hb_005723_090 Hb_001158_250--Hb_000622_030 Hb_000120_480 Hb_000120_480 Hb_001158_250--Hb_000120_480 Hb_001158_250--Hb_005723_090 Hb_001305_020 Hb_001305_020 Hb_001158_250--Hb_001305_020 Hb_001158_250--Hb_000271_130 Hb_000622_030--Hb_001305_020 Hb_000622_030--Hb_005723_090 Hb_000622_030--Hb_000000_290 Hb_005183_100 Hb_005183_100 Hb_000622_030--Hb_005183_100 Hb_000395_230 Hb_000395_230 Hb_000271_130--Hb_000395_230 Hb_000271_130--Hb_000120_480 Hb_000271_130--Hb_005183_100 Hb_000271_130--Hb_005723_090 Hb_009522_020 Hb_009522_020 Hb_000271_130--Hb_009522_020 Hb_000023_180 Hb_000023_180 Hb_000000_290--Hb_000023_180 Hb_000000_290--Hb_005183_100 Hb_000000_290--Hb_005723_090 Hb_002835_070 Hb_002835_070 Hb_000000_290--Hb_002835_070 Hb_016277_030 Hb_016277_030 Hb_000000_290--Hb_016277_030 Hb_001950_100--Hb_000622_030 Hb_001950_100--Hb_000023_180 Hb_001950_100--Hb_000000_290 Hb_005725_160 Hb_005725_160 Hb_001950_100--Hb_005725_160 Hb_002168_070 Hb_002168_070 Hb_001950_100--Hb_002168_070 Hb_005723_090--Hb_005183_100 Hb_005057_030 Hb_005057_030 Hb_005723_090--Hb_005057_030 Hb_005723_090--Hb_000120_480 Hb_005723_090--Hb_001305_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0279647 2.69013 1.2933 6.03052 0.0543055 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0917435 0.408721 6.61957

CAGE analysis