Hb_001242_190

Information

Type -
Description -
Location Contig1242: 215625-223986
Sequence    

Annotation

kegg
ID pop:POPTR_0005s21970g
description POPTRDRAFT_861161; hypothetical protein
nr
ID XP_012086027.1
description PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 1 isoform X3 [Jatropha curcas]
swissprot
ID Q84MA2
description Type I inositol 1,4,5-trisphosphate 5-phosphatase 1 OS=Arabidopsis thaliana GN=IP5P1 PE=1 SV=2
trembl
ID A0A067K319
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22273 PE=4 SV=1
Gene Ontology
ID GO:0046856
description type i inositol -trisphosphate 5-phosphatase 1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07365: 215665-223231
cDNA
(Sanger)
(ID:Location)		 006_C13.ab1: 215665-215862

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001242_190 0.0 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 1 isoform X3 [Jatropha curcas]
2 Hb_001619_160 0.1051209359 transcription factor TF Family: ERF DREB1p [Hevea brasiliensis]
3 Hb_065525_010 0.1141491614 - - hypothetical protein JCGZ_01481 [Jatropha curcas]
4 Hb_006052_060 0.1190639581 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
5 Hb_001318_140 0.1249980312 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
6 Hb_000207_290 0.1491359034 - - hypothetical protein JCGZ_03920 [Jatropha curcas]
7 Hb_001049_160 0.1500575492 - - aldose 1-epimerase, putative [Ricinus communis]
8 Hb_172676_010 0.1503630392 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
9 Hb_007850_010 0.1525136361 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.4 [Jatropha curcas]
10 Hb_019863_060 0.1540614236 - - PREDICTED: target of Myb protein 1-like [Populus euphratica]
11 Hb_004574_040 0.1577208161 - - PREDICTED: putative L-type lectin-domain containing receptor kinase II.2 [Jatropha curcas]
12 Hb_000087_100 0.1590409738 - - PREDICTED: cellulose synthase-like protein D3 [Jatropha curcas]
13 Hb_004605_020 0.159891305 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Jatropha curcas]
14 Hb_013405_100 0.1611868247 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
15 Hb_061908_020 0.16139022 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
16 Hb_007382_100 0.1615260556 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
17 Hb_002217_070 0.1629750988 - - PREDICTED: uncharacterized protein LOC105643596 [Jatropha curcas]
18 Hb_026698_020 0.1631339135 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
19 Hb_002154_020 0.1636598991 - - protein with unknown function [Ricinus communis]
20 Hb_000120_160 0.1657921125 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_001242_190 Hb_001242_190 Hb_001619_160 Hb_001619_160 Hb_001242_190--Hb_001619_160 Hb_065525_010 Hb_065525_010 Hb_001242_190--Hb_065525_010 Hb_006052_060 Hb_006052_060 Hb_001242_190--Hb_006052_060 Hb_001318_140 Hb_001318_140 Hb_001242_190--Hb_001318_140 Hb_000207_290 Hb_000207_290 Hb_001242_190--Hb_000207_290 Hb_001049_160 Hb_001049_160 Hb_001242_190--Hb_001049_160 Hb_001619_160--Hb_006052_060 Hb_001619_160--Hb_001318_140 Hb_001619_160--Hb_065525_010 Hb_001619_160--Hb_001049_160 Hb_007382_100 Hb_007382_100 Hb_001619_160--Hb_007382_100 Hb_065525_010--Hb_001318_140 Hb_013405_100 Hb_013405_100 Hb_065525_010--Hb_013405_100 Hb_065525_010--Hb_006052_060 Hb_149484_010 Hb_149484_010 Hb_065525_010--Hb_149484_010 Hb_003430_070 Hb_003430_070 Hb_006052_060--Hb_003430_070 Hb_006052_060--Hb_001318_140 Hb_172676_010 Hb_172676_010 Hb_006052_060--Hb_172676_010 Hb_006052_060--Hb_149484_010 Hb_001318_140--Hb_007382_100 Hb_000087_100 Hb_000087_100 Hb_001318_140--Hb_000087_100 Hb_001318_140--Hb_149484_010 Hb_000805_190 Hb_000805_190 Hb_000207_290--Hb_000805_190 Hb_002876_250 Hb_002876_250 Hb_000207_290--Hb_002876_250 Hb_000056_280 Hb_000056_280 Hb_000207_290--Hb_000056_280 Hb_000116_210 Hb_000116_210 Hb_000207_290--Hb_000116_210 Hb_000207_290--Hb_001049_160 Hb_001486_200 Hb_001486_200 Hb_000207_290--Hb_001486_200 Hb_002027_170 Hb_002027_170 Hb_001049_160--Hb_002027_170 Hb_001049_160--Hb_007382_100 Hb_001049_160--Hb_002876_250 Hb_001049_160--Hb_001486_200 Hb_001049_160--Hb_001318_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.1827 37.4081 10.8512 12.8224 1.1737 1.30833
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32044 2.29683 4.87536 10.4171 17.3261

CAGE analysis