Hb_001246_150

Information

Type -
Description -
Location Contig1246: 126692-133222
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021024mg
description hypothetical protein
nr
ID EYU18267.1
description hypothetical protein MIMGU_mgv1a021562mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022PPM0
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021562mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description PREDICTED: uncharacterized protein LOC105634770

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001246_150 0.0 - - hypothetical protein MIMGU_mgv1a021562mg [Erythranthe guttata]
2 Hb_005211_110 0.0105890231 - - hypothetical protein POPTR_0010s13790g [Populus trichocarpa]
3 Hb_048308_010 0.0108209232 - - Peroxidase superfamily protein [Theobroma cacao]
4 Hb_008764_010 0.0927917922 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]
5 Hb_000933_120 0.0940234218 - - hypothetical protein L484_011925 [Morus notabilis]
6 Hb_000976_420 0.0944875842 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000507_010 0.1030637132 - - hypothetical protein POPTR_0007s02420g [Populus trichocarpa]
8 Hb_001998_190 0.1036588489 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
9 Hb_019952_010 0.1137076294 - - -
10 Hb_000203_030 0.1169545499 - - -
11 Hb_011671_200 0.1367520271 - - -
12 Hb_142734_020 0.1385565997 - - PREDICTED: uncharacterized protein LOC105764710 isoform X1 [Gossypium raimondii]
13 Hb_000059_290 0.1482394342 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
14 Hb_004725_040 0.1589334661 - - -
15 Hb_000856_330 0.1617832549 - - PREDICTED: protein QUIRKY isoform X1 [Cicer arietinum]
16 Hb_000408_010 0.1650835603 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
17 Hb_002435_070 0.1706674099 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
18 Hb_005433_030 0.1788921503 transcription factor TF Family: MYB unnamed protein product [Vitis vinifera]
19 Hb_001300_120 0.1790203002 - - PREDICTED: stress response protein nst1-like [Jatropha curcas]
20 Hb_002374_360 0.1863667739 - - hypothetical protein POPTR_0002s08300g [Populus trichocarpa]

Gene co-expression network

sample Hb_001246_150 Hb_001246_150 Hb_005211_110 Hb_005211_110 Hb_001246_150--Hb_005211_110 Hb_048308_010 Hb_048308_010 Hb_001246_150--Hb_048308_010 Hb_008764_010 Hb_008764_010 Hb_001246_150--Hb_008764_010 Hb_000933_120 Hb_000933_120 Hb_001246_150--Hb_000933_120 Hb_000976_420 Hb_000976_420 Hb_001246_150--Hb_000976_420 Hb_000507_010 Hb_000507_010 Hb_001246_150--Hb_000507_010 Hb_005211_110--Hb_048308_010 Hb_005211_110--Hb_008764_010 Hb_005211_110--Hb_000976_420 Hb_005211_110--Hb_000933_120 Hb_005211_110--Hb_000507_010 Hb_048308_010--Hb_008764_010 Hb_048308_010--Hb_000976_420 Hb_048308_010--Hb_000933_120 Hb_048308_010--Hb_000507_010 Hb_002435_070 Hb_002435_070 Hb_008764_010--Hb_002435_070 Hb_004725_040 Hb_004725_040 Hb_008764_010--Hb_004725_040 Hb_142734_020 Hb_142734_020 Hb_008764_010--Hb_142734_020 Hb_000933_120--Hb_000507_010 Hb_019952_010 Hb_019952_010 Hb_000933_120--Hb_019952_010 Hb_000933_120--Hb_000976_420 Hb_001998_190 Hb_001998_190 Hb_000933_120--Hb_001998_190 Hb_000856_330 Hb_000856_330 Hb_000933_120--Hb_000856_330 Hb_001300_120 Hb_001300_120 Hb_000933_120--Hb_001300_120 Hb_011671_200 Hb_011671_200 Hb_000976_420--Hb_011671_200 Hb_000976_420--Hb_019952_010 Hb_000976_420--Hb_000507_010 Hb_000976_420--Hb_000856_330 Hb_000976_420--Hb_001300_120 Hb_000507_010--Hb_019952_010 Hb_000507_010--Hb_001998_190 Hb_000507_010--Hb_000856_330 Hb_000507_010--Hb_001300_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0066356 0.00993337 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00475068 0

CAGE analysis