Hb_001247_150

Information

Type -
Description -
Location Contig1247: 90142-90402
Sequence    

Annotation

kegg
ID rcu:RCOM_1436350
description hypothetical protein
nr
ID KDP23346.1
description hypothetical protein JCGZ_23179 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JHD3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23179 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07485: 90018-90612
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001247_150 0.0 - - hypothetical protein JCGZ_23179 [Jatropha curcas]
2 Hb_000932_060 0.1034268576 - - conserved hypothetical protein [Ricinus communis]
3 Hb_021065_010 0.1071230149 - - PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
4 Hb_000834_180 0.1098551765 - - PREDICTED: kinesin-13A-like isoform X1 [Jatropha curcas]
5 Hb_000418_170 0.1179871466 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
6 Hb_009113_080 0.1202369886 - - PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]
7 Hb_022092_110 0.1252409337 - - PREDICTED: probable protein phosphatase 2C 52 [Jatropha curcas]
8 Hb_001946_200 0.1286318648 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
9 Hb_026240_020 0.135007558 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
10 Hb_001936_180 0.1390157156 - - PREDICTED: protein NSP-INTERACTING KINASE 3 [Jatropha curcas]
11 Hb_002217_360 0.1390801147 - - PREDICTED: nuclear poly(A) polymerase 3 isoform X1 [Jatropha curcas]
12 Hb_001085_190 0.1425879324 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
13 Hb_031385_010 0.1426423411 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
14 Hb_000527_050 0.1429215755 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004410_110 0.1441229023 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_007290_050 0.1452898102 - - PREDICTED: uncharacterized protein LOC105629472 isoform X1 [Jatropha curcas]
17 Hb_003092_020 0.1470008081 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
18 Hb_000735_060 0.1497636497 - - PREDICTED: U-box domain-containing protein 9 [Jatropha curcas]
19 Hb_005730_110 0.1501099895 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
20 Hb_106089_010 0.1509623002 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]

Gene co-expression network

sample Hb_001247_150 Hb_001247_150 Hb_000932_060 Hb_000932_060 Hb_001247_150--Hb_000932_060 Hb_021065_010 Hb_021065_010 Hb_001247_150--Hb_021065_010 Hb_000834_180 Hb_000834_180 Hb_001247_150--Hb_000834_180 Hb_000418_170 Hb_000418_170 Hb_001247_150--Hb_000418_170 Hb_009113_080 Hb_009113_080 Hb_001247_150--Hb_009113_080 Hb_022092_110 Hb_022092_110 Hb_001247_150--Hb_022092_110 Hb_001936_180 Hb_001936_180 Hb_000932_060--Hb_001936_180 Hb_000932_060--Hb_022092_110 Hb_010557_020 Hb_010557_020 Hb_000932_060--Hb_010557_020 Hb_026240_020 Hb_026240_020 Hb_000932_060--Hb_026240_020 Hb_001946_200 Hb_001946_200 Hb_000932_060--Hb_001946_200 Hb_003097_130 Hb_003097_130 Hb_021065_010--Hb_003097_130 Hb_021065_010--Hb_000418_170 Hb_005675_050 Hb_005675_050 Hb_021065_010--Hb_005675_050 Hb_000527_050 Hb_000527_050 Hb_021065_010--Hb_000527_050 Hb_001085_190 Hb_001085_190 Hb_021065_010--Hb_001085_190 Hb_000834_220 Hb_000834_220 Hb_000834_180--Hb_000834_220 Hb_031385_010 Hb_031385_010 Hb_000834_180--Hb_031385_010 Hb_000834_180--Hb_001946_200 Hb_000834_180--Hb_009113_080 Hb_002217_360 Hb_002217_360 Hb_000834_180--Hb_002217_360 Hb_000627_040 Hb_000627_040 Hb_000418_170--Hb_000627_040 Hb_000418_170--Hb_022092_110 Hb_005730_110 Hb_005730_110 Hb_000418_170--Hb_005730_110 Hb_000418_170--Hb_001936_180 Hb_000418_170--Hb_005675_050 Hb_009113_080--Hb_001946_200 Hb_009113_080--Hb_001085_190 Hb_000977_030 Hb_000977_030 Hb_009113_080--Hb_000977_030 Hb_000005_360 Hb_000005_360 Hb_009113_080--Hb_000005_360 Hb_003125_210 Hb_003125_210 Hb_009113_080--Hb_003125_210 Hb_001318_100 Hb_001318_100 Hb_009113_080--Hb_001318_100 Hb_022092_110--Hb_001936_180 Hb_022092_110--Hb_001946_200 Hb_001440_010 Hb_001440_010 Hb_022092_110--Hb_001440_010 Hb_000735_060 Hb_000735_060 Hb_022092_110--Hb_000735_060 Hb_002311_280 Hb_002311_280 Hb_022092_110--Hb_002311_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.03534 5.82694 6.7471 0 0.237864
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.568608 2.03221 3.66793

CAGE analysis