Hb_001252_050

Information

Type -
Description -
Location Contig1252: 46260-48574
Sequence    

Annotation

kegg
ID fve:101299606
description wall-associated receptor kinase-like 20-like
nr
ID XP_010098860.1
description Wall-associated receptor kinase-like 20 [Morus notabilis]
swissprot
ID C0LGD7
description Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=2 SV=2
trembl
ID W9R8G7
description Wall-associated receptor kinase-like 20 OS=Morus notabilis GN=L484_022625 PE=3 SV=1
Gene Ontology
ID GO:0004674
description wall-associated receptor kinase-like 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001252_050 0.0 - - Wall-associated receptor kinase-like 20 [Morus notabilis]
2 Hb_000343_220 0.0835976578 - - hypothetical protein CISIN_1g037489mg [Citrus sinensis]
3 Hb_008143_050 0.098852953 - - PREDICTED: cytochrome P450 710A1-like [Jatropha curcas]
4 Hb_000696_250 0.0990958842 - - PREDICTED: patellin-6 [Jatropha curcas]
5 Hb_006711_040 0.1066382697 - - PREDICTED: probable protein ABIL5 [Jatropha curcas]
6 Hb_000417_140 0.1105887849 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
7 Hb_008143_060 0.1119031152 - - PREDICTED: putative hydrolase C777.06c isoform X2 [Jatropha curcas]
8 Hb_009767_030 0.1149252767 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
9 Hb_001776_070 0.1177795413 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
10 Hb_001832_140 0.1185757054 - - endomembrane protein 70 family protein [Medicago truncatula]
11 Hb_027556_060 0.1191156958 - - hypothetical protein POPTR_0001s03520g [Populus trichocarpa]
12 Hb_000535_040 0.1193758648 - - PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]
13 Hb_000272_010 0.1291159532 - - PREDICTED: DNA replication licensing factor MCM5 [Jatropha curcas]
14 Hb_001195_740 0.1313250055 transcription factor TF Family: LIM PREDICTED: protein DA1 isoform X1 [Jatropha curcas]
15 Hb_000490_040 0.136202432 - - PREDICTED: cyclin-D3-1 [Jatropha curcas]
16 Hb_013358_030 0.1370428694 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
17 Hb_000465_130 0.1416425713 transcription factor TF Family: ERF hypothetical protein POPTR_0001s15550g [Populus trichocarpa]
18 Hb_002081_190 0.1445379102 - - hypothetical protein EUGRSUZ_I010391, partial [Eucalyptus grandis]
19 Hb_004846_080 0.147485761 - - DNA replication licensing factor MCM3, putative [Ricinus communis]
20 Hb_080147_070 0.1490526499 - - Rop5 [Hevea brasiliensis]

Gene co-expression network

sample Hb_001252_050 Hb_001252_050 Hb_000343_220 Hb_000343_220 Hb_001252_050--Hb_000343_220 Hb_008143_050 Hb_008143_050 Hb_001252_050--Hb_008143_050 Hb_000696_250 Hb_000696_250 Hb_001252_050--Hb_000696_250 Hb_006711_040 Hb_006711_040 Hb_001252_050--Hb_006711_040 Hb_000417_140 Hb_000417_140 Hb_001252_050--Hb_000417_140 Hb_008143_060 Hb_008143_060 Hb_001252_050--Hb_008143_060 Hb_000343_220--Hb_006711_040 Hb_002081_190 Hb_002081_190 Hb_000343_220--Hb_002081_190 Hb_000490_040 Hb_000490_040 Hb_000343_220--Hb_000490_040 Hb_000272_010 Hb_000272_010 Hb_000343_220--Hb_000272_010 Hb_000128_050 Hb_000128_050 Hb_000343_220--Hb_000128_050 Hb_000535_040 Hb_000535_040 Hb_008143_050--Hb_000535_040 Hb_005306_030 Hb_005306_030 Hb_008143_050--Hb_005306_030 Hb_008143_050--Hb_000417_140 Hb_008143_050--Hb_000272_010 Hb_000260_670 Hb_000260_670 Hb_008143_050--Hb_000260_670 Hb_001832_140 Hb_001832_140 Hb_000696_250--Hb_001832_140 Hb_000018_120 Hb_000018_120 Hb_000696_250--Hb_000018_120 Hb_001349_020 Hb_001349_020 Hb_000696_250--Hb_001349_020 Hb_009767_030 Hb_009767_030 Hb_000696_250--Hb_009767_030 Hb_022092_050 Hb_022092_050 Hb_000696_250--Hb_022092_050 Hb_006711_040--Hb_000490_040 Hb_006711_040--Hb_008143_060 Hb_006711_040--Hb_001832_140 Hb_006711_040--Hb_000272_010 Hb_000417_140--Hb_006711_040 Hb_000417_140--Hb_000272_010 Hb_024682_030 Hb_024682_030 Hb_000417_140--Hb_024682_030 Hb_000417_140--Hb_000535_040 Hb_001195_740 Hb_001195_740 Hb_008143_060--Hb_001195_740 Hb_008143_060--Hb_001832_140 Hb_008143_060--Hb_000696_250 Hb_000465_130 Hb_000465_130 Hb_008143_060--Hb_000465_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.395914 3.38083 2.6739 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0217017 0 0 2.47201 0.469613

CAGE analysis