Hb_001252_070

Information

Type -
Description -
Location Contig1252: 71299-73703
Sequence    

Annotation

kegg
ID rcu:RCOM_1481900
description kinase, putative (EC:2.7.11.30)
nr
ID KDP44885.1
description hypothetical protein JCGZ_01385 [Jatropha curcas]
swissprot
ID Q9C9L5
description Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1
trembl
ID A0A067LJP0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01385 PE=3 SV=1
Gene Ontology
ID GO:0004674
description wall-associated receptor kinase-like 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07714: 71431-72948 , PASA_asmbl_07715: 73075-73226 , PASA_asmbl_07716: 73236-73605
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001252_070 0.0 - - hypothetical protein JCGZ_01385 [Jatropha curcas]
2 Hb_002217_040 0.1277413033 - - PREDICTED: boron transporter 1-like [Jatropha curcas]
3 Hb_005144_080 0.136235756 - - Serine carboxypeptidase, putative [Ricinus communis]
4 Hb_000696_030 0.1367149642 - - PREDICTED: uncharacterized protein LOC105647085 isoform X1 [Jatropha curcas]
5 Hb_005839_030 0.1420034408 - - PREDICTED: potassium transporter 2 [Jatropha curcas]
6 Hb_000544_130 0.1426357806 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
7 Hb_001157_190 0.1492616098 - - PREDICTED: protein YLS3 [Jatropha curcas]
8 Hb_001832_140 0.1498635641 - - endomembrane protein 70 family protein [Medicago truncatula]
9 Hb_008143_060 0.1503078289 - - PREDICTED: putative hydrolase C777.06c isoform X2 [Jatropha curcas]
10 Hb_001195_740 0.1556547735 transcription factor TF Family: LIM PREDICTED: protein DA1 isoform X1 [Jatropha curcas]
11 Hb_000749_120 0.1562761125 - - PREDICTED: uncharacterized protein LOC105644255 isoform X2 [Jatropha curcas]
12 Hb_002072_040 0.1573745631 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
13 Hb_004525_110 0.1574837153 - - hypothetical protein POPTR_0007s12850g [Populus trichocarpa]
14 Hb_164926_040 0.159871466 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
15 Hb_006277_030 0.1601314252 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004846_080 0.1611130858 - - DNA replication licensing factor MCM3, putative [Ricinus communis]
17 Hb_000696_250 0.1653747548 - - PREDICTED: patellin-6 [Jatropha curcas]
18 Hb_001040_200 0.1702870518 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Jatropha curcas]
19 Hb_005731_070 0.1708885568 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002592_050 0.1747853617 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001252_070 Hb_001252_070 Hb_002217_040 Hb_002217_040 Hb_001252_070--Hb_002217_040 Hb_005144_080 Hb_005144_080 Hb_001252_070--Hb_005144_080 Hb_000696_030 Hb_000696_030 Hb_001252_070--Hb_000696_030 Hb_005839_030 Hb_005839_030 Hb_001252_070--Hb_005839_030 Hb_000544_130 Hb_000544_130 Hb_001252_070--Hb_000544_130 Hb_001157_190 Hb_001157_190 Hb_001252_070--Hb_001157_190 Hb_002217_040--Hb_000544_130 Hb_002217_040--Hb_005839_030 Hb_055440_010 Hb_055440_010 Hb_002217_040--Hb_055440_010 Hb_003674_020 Hb_003674_020 Hb_002217_040--Hb_003674_020 Hb_002592_050 Hb_002592_050 Hb_002217_040--Hb_002592_050 Hb_002025_380 Hb_002025_380 Hb_005144_080--Hb_002025_380 Hb_006277_030 Hb_006277_030 Hb_005144_080--Hb_006277_030 Hb_004282_010 Hb_004282_010 Hb_005144_080--Hb_004282_010 Hb_005731_070 Hb_005731_070 Hb_005144_080--Hb_005731_070 Hb_005144_080--Hb_005839_030 Hb_011129_020 Hb_011129_020 Hb_005144_080--Hb_011129_020 Hb_000696_030--Hb_001157_190 Hb_001776_070 Hb_001776_070 Hb_000696_030--Hb_001776_070 Hb_005679_110 Hb_005679_110 Hb_000696_030--Hb_005679_110 Hb_000696_030--Hb_005839_030 Hb_001195_740 Hb_001195_740 Hb_000696_030--Hb_001195_740 Hb_000696_030--Hb_005144_080 Hb_005839_030--Hb_002592_050 Hb_005839_030--Hb_001157_190 Hb_005839_030--Hb_011129_020 Hb_004079_100 Hb_004079_100 Hb_005839_030--Hb_004079_100 Hb_003226_050 Hb_003226_050 Hb_000544_130--Hb_003226_050 Hb_000161_230 Hb_000161_230 Hb_000544_130--Hb_000161_230 Hb_000187_110 Hb_000187_110 Hb_000544_130--Hb_000187_110 Hb_000979_080 Hb_000979_080 Hb_000544_130--Hb_000979_080 Hb_001157_190--Hb_001195_740 Hb_002918_120 Hb_002918_120 Hb_001157_190--Hb_002918_120 Hb_001597_030 Hb_001597_030 Hb_001157_190--Hb_001597_030 Hb_001157_190--Hb_005731_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.138776 0.383568 2.10626 2.52045 0.0843461 0.0891796
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0657008 0.0516958 0 3.34469 0.583136

CAGE analysis