Hb_001252_170

Information

Type desease resistance
Description Gene Name: Exostosin
Location Contig1252: 158883-195725
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001357mg
description hypothetical protein
nr
ID XP_007220604.1
description hypothetical protein PRUPE_ppa001357mg [Prunus persica]
swissprot
ID F4K2A1
description Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1 SV=1
trembl
ID M5XJV9
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001357mg PE=4 SV=1
Gene Ontology
ID GO:0004326
description folylpolyglutamate synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07738: 159093-160135 , PASA_asmbl_07739: 163516-171449 , PASA_asmbl_07740: 174046-174263
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001252_170 0.0 desease resistance Gene Name: Exostosin hypothetical protein PRUPE_ppa001357mg [Prunus persica]
2 Hb_118301_010 0.0971292922 - - Endoribonuclease Dicer-1-like protein [Morus notabilis]
3 Hb_000186_010 0.1025740351 - - PREDICTED: EH domain-containing protein 1 [Jatropha curcas]
4 Hb_001477_010 0.1040390129 - - PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]
5 Hb_077219_010 0.1076704326 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002290_060 0.1114744116 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
7 Hb_000152_740 0.1136716351 - - Cisplatin resistance-associated overexpressed protein, putative [Ricinus communis]
8 Hb_002955_010 0.1158532683 - - PREDICTED: Werner syndrome ATP-dependent helicase homolog [Jatropha curcas]
9 Hb_000248_050 0.11874224 - - PREDICTED: uncharacterized protein LOC105647198 isoform X3 [Jatropha curcas]
10 Hb_000565_020 0.1191487763 - - PREDICTED: alpha-galactosidase 3 [Jatropha curcas]
11 Hb_000466_060 0.1221521139 - - phosphofructokinase [Hevea brasiliensis]
12 Hb_000256_270 0.123530833 - - PREDICTED: large proline-rich protein bag6-B isoform X1 [Jatropha curcas]
13 Hb_000085_280 0.1254811596 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
14 Hb_000282_150 0.1277929258 - - PREDICTED: probable beta-1,3-galactosyltransferase 12 [Jatropha curcas]
15 Hb_000042_230 0.1304239394 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Jatropha curcas]
16 Hb_013405_130 0.1377011971 - - hypothetical protein CICLE_v10032221mg [Citrus clementina]
17 Hb_002837_070 0.137870101 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 8-like isoform X1 [Jatropha curcas]
18 Hb_000028_030 0.1391069026 - - amidase, putative [Ricinus communis]
19 Hb_003813_100 0.1409487337 - - PREDICTED: proteasome subunit beta type-3-A [Cucumis sativus]
20 Hb_113216_010 0.1415940319 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]

Gene co-expression network

sample Hb_001252_170 Hb_001252_170 Hb_118301_010 Hb_118301_010 Hb_001252_170--Hb_118301_010 Hb_000186_010 Hb_000186_010 Hb_001252_170--Hb_000186_010 Hb_001477_010 Hb_001477_010 Hb_001252_170--Hb_001477_010 Hb_077219_010 Hb_077219_010 Hb_001252_170--Hb_077219_010 Hb_002290_060 Hb_002290_060 Hb_001252_170--Hb_002290_060 Hb_000152_740 Hb_000152_740 Hb_001252_170--Hb_000152_740 Hb_118301_010--Hb_000152_740 Hb_000017_340 Hb_000017_340 Hb_118301_010--Hb_000017_340 Hb_005288_120 Hb_005288_120 Hb_118301_010--Hb_005288_120 Hb_118301_010--Hb_001477_010 Hb_000028_030 Hb_000028_030 Hb_118301_010--Hb_000028_030 Hb_000085_280 Hb_000085_280 Hb_000186_010--Hb_000085_280 Hb_000042_230 Hb_000042_230 Hb_000186_010--Hb_000042_230 Hb_000028_050 Hb_000028_050 Hb_000186_010--Hb_000028_050 Hb_000186_010--Hb_005288_120 Hb_013405_130 Hb_013405_130 Hb_000186_010--Hb_013405_130 Hb_000256_270 Hb_000256_270 Hb_001477_010--Hb_000256_270 Hb_001477_010--Hb_002290_060 Hb_002955_010 Hb_002955_010 Hb_001477_010--Hb_002955_010 Hb_012807_080 Hb_012807_080 Hb_001477_010--Hb_012807_080 Hb_000565_020 Hb_000565_020 Hb_077219_010--Hb_000565_020 Hb_077219_010--Hb_000085_280 Hb_077219_010--Hb_002290_060 Hb_077219_010--Hb_001477_010 Hb_000856_100 Hb_000856_100 Hb_077219_010--Hb_000856_100 Hb_002290_060--Hb_000085_280 Hb_035524_030 Hb_035524_030 Hb_002290_060--Hb_035524_030 Hb_002290_060--Hb_002955_010 Hb_024714_030 Hb_024714_030 Hb_002290_060--Hb_024714_030 Hb_063047_010 Hb_063047_010 Hb_000152_740--Hb_063047_010 Hb_005000_100 Hb_005000_100 Hb_000152_740--Hb_005000_100 Hb_000152_740--Hb_000042_230 Hb_000152_740--Hb_000017_340 Hb_000152_740--Hb_000028_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.4401 4.73988 1.38734 3.15146 21.2659 55.6813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.127 5.51082 7.14783 6.62543 1.58807

CAGE analysis