Hb_001257_010

Information

Type -
Description -
Location Contig1257: 18760-22367
Sequence    

Annotation

kegg
ID pop:POPTR_0001s22560g
description POPTRDRAFT_751961; pyridine nucleotide-disulfide oxidoreductase family protein
nr
ID XP_012086316.1
description PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Jatropha curcas]
swissprot
ID Q54NS8
description Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum GN=aifB PE=3 SV=1
trembl
ID A0A067JSW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22979 PE=4 SV=1
Gene Ontology
ID GO:0005794
description pyridine nucleotide-disulfide oxidoreductase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07838: 18813-22291 , PASA_asmbl_07839: 21298-21664
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001257_010 0.0 - - PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Jatropha curcas]
2 Hb_000041_110 0.0706217657 - - PREDICTED: WW domain-binding protein 11 isoform X1 [Jatropha curcas]
3 Hb_002518_260 0.0783552963 - - PREDICTED: zinc finger CCCH domain-containing protein 40-like [Jatropha curcas]
4 Hb_000258_160 0.0814707945 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004079_060 0.083104293 - - hypothetical protein JCGZ_07228 [Jatropha curcas]
6 Hb_019863_070 0.0844215981 - - PREDICTED: regulatory-associated protein of TOR 1 isoform X1 [Jatropha curcas]
7 Hb_001304_110 0.0859893328 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
8 Hb_003465_030 0.0885201407 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005730_090 0.0890537384 - - PREDICTED: uncharacterized protein LOC105631484 [Jatropha curcas]
10 Hb_008554_130 0.0903358412 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105634317 [Jatropha curcas]
11 Hb_001946_290 0.0905768957 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform X1 [Jatropha curcas]
12 Hb_000003_590 0.0910970283 - - PREDICTED: uncharacterized protein LOC105631550 isoform X2 [Jatropha curcas]
13 Hb_000868_090 0.0918747495 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 4 [Jatropha curcas]
14 Hb_005686_090 0.0926042195 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X1 [Jatropha curcas]
15 Hb_009486_140 0.0928730547 - - PREDICTED: uncharacterized protein LOC105643248 [Jatropha curcas]
16 Hb_011386_010 0.0930172062 - - mitochondrial carrier protein, putative [Ricinus communis]
17 Hb_001417_030 0.0933043326 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
18 Hb_000792_010 0.0938406439 - - PREDICTED: mRNA-capping enzyme [Jatropha curcas]
19 Hb_000025_640 0.0946149002 - - PREDICTED: probable magnesium transporter NIPA6 isoform X1 [Jatropha curcas]
20 Hb_001999_290 0.0946622465 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_001257_010 Hb_001257_010 Hb_000041_110 Hb_000041_110 Hb_001257_010--Hb_000041_110 Hb_002518_260 Hb_002518_260 Hb_001257_010--Hb_002518_260 Hb_000258_160 Hb_000258_160 Hb_001257_010--Hb_000258_160 Hb_004079_060 Hb_004079_060 Hb_001257_010--Hb_004079_060 Hb_019863_070 Hb_019863_070 Hb_001257_010--Hb_019863_070 Hb_001304_110 Hb_001304_110 Hb_001257_010--Hb_001304_110 Hb_000041_110--Hb_002518_260 Hb_009486_140 Hb_009486_140 Hb_000041_110--Hb_009486_140 Hb_000041_110--Hb_000258_160 Hb_000297_010 Hb_000297_010 Hb_000041_110--Hb_000297_010 Hb_000792_010 Hb_000792_010 Hb_000041_110--Hb_000792_010 Hb_000329_710 Hb_000329_710 Hb_000041_110--Hb_000329_710 Hb_002518_260--Hb_000792_010 Hb_000028_480 Hb_000028_480 Hb_002518_260--Hb_000028_480 Hb_002518_260--Hb_009486_140 Hb_011386_010 Hb_011386_010 Hb_002518_260--Hb_011386_010 Hb_002518_260--Hb_000329_710 Hb_003494_020 Hb_003494_020 Hb_000258_160--Hb_003494_020 Hb_000258_160--Hb_019863_070 Hb_000340_530 Hb_000340_530 Hb_000258_160--Hb_000340_530 Hb_000258_160--Hb_004079_060 Hb_162275_050 Hb_162275_050 Hb_000258_160--Hb_162275_050 Hb_001999_290 Hb_001999_290 Hb_004079_060--Hb_001999_290 Hb_062226_070 Hb_062226_070 Hb_004079_060--Hb_062226_070 Hb_000473_110 Hb_000473_110 Hb_004079_060--Hb_000473_110 Hb_000174_270 Hb_000174_270 Hb_004079_060--Hb_000174_270 Hb_004079_060--Hb_003494_020 Hb_002818_030 Hb_002818_030 Hb_019863_070--Hb_002818_030 Hb_003849_110 Hb_003849_110 Hb_019863_070--Hb_003849_110 Hb_000868_090 Hb_000868_090 Hb_019863_070--Hb_000868_090 Hb_005054_110 Hb_005054_110 Hb_019863_070--Hb_005054_110 Hb_015807_150 Hb_015807_150 Hb_019863_070--Hb_015807_150 Hb_005582_040 Hb_005582_040 Hb_001304_110--Hb_005582_040 Hb_010068_080 Hb_010068_080 Hb_001304_110--Hb_010068_080 Hb_005686_090 Hb_005686_090 Hb_001304_110--Hb_005686_090 Hb_001304_110--Hb_001999_290 Hb_001304_110--Hb_011386_010 Hb_001304_110--Hb_005054_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.5267 33.0489 16.5807 22.62 30.549 18.9504
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.7151 34.483 35.0624 28.7145 36.1414

CAGE analysis