Hb_001257_020

Information

Type -
Description -
Location Contig1257: 25937-39089
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001257_020 0.0 - - -
2 Hb_007761_050 0.0901569856 - - calcineurin-like protein [Hevea brasiliensis]
3 Hb_000003_770 0.1311180842 - - -
4 Hb_001379_130 0.1347562587 - - PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Jatropha curcas]
5 Hb_148262_020 0.1492417589 - - -
6 Hb_088496_010 0.1736150515 - - PREDICTED: uncharacterized protein LOC104889111 [Beta vulgaris subsp. vulgaris]
7 Hb_004297_030 0.1940417577 - - PREDICTED: uncharacterized protein LOC105633198 [Jatropha curcas]
8 Hb_000284_070 0.2010480055 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
9 Hb_000270_150 0.205501639 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
10 Hb_106029_010 0.2134133709 - - Transcription factor ICE1, putative [Ricinus communis]
11 Hb_175572_010 0.232402716 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
12 Hb_005222_020 0.2330970073 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
13 Hb_001865_110 0.2354067112 - - -
14 Hb_000067_020 0.2475421421 desease resistance Gene Name: NB-ARC PREDICTED: inactive disease resistance protein RPS4-like [Jatropha curcas]
15 Hb_000736_010 0.2481346713 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
16 Hb_000094_260 0.2512634014 - - conserved hypothetical protein [Ricinus communis]
17 Hb_140618_010 0.2520592584 - - -
18 Hb_001241_090 0.2520592607 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
19 Hb_052600_010 0.2520593035 - - -
20 Hb_005396_140 0.2520708253 - - -

Gene co-expression network

sample Hb_001257_020 Hb_001257_020 Hb_007761_050 Hb_007761_050 Hb_001257_020--Hb_007761_050 Hb_000003_770 Hb_000003_770 Hb_001257_020--Hb_000003_770 Hb_001379_130 Hb_001379_130 Hb_001257_020--Hb_001379_130 Hb_148262_020 Hb_148262_020 Hb_001257_020--Hb_148262_020 Hb_088496_010 Hb_088496_010 Hb_001257_020--Hb_088496_010 Hb_004297_030 Hb_004297_030 Hb_001257_020--Hb_004297_030 Hb_000284_070 Hb_000284_070 Hb_007761_050--Hb_000284_070 Hb_007761_050--Hb_088496_010 Hb_007761_050--Hb_148262_020 Hb_007761_050--Hb_000003_770 Hb_007761_050--Hb_004297_030 Hb_000003_770--Hb_001379_130 Hb_000003_770--Hb_088496_010 Hb_000003_770--Hb_004297_030 Hb_012324_020 Hb_012324_020 Hb_000003_770--Hb_012324_020 Hb_094721_010 Hb_094721_010 Hb_000003_770--Hb_094721_010 Hb_001379_130--Hb_088496_010 Hb_001379_130--Hb_012324_020 Hb_001379_130--Hb_094721_010 Hb_001379_130--Hb_004297_030 Hb_106029_010 Hb_106029_010 Hb_148262_020--Hb_106029_010 Hb_000270_150 Hb_000270_150 Hb_148262_020--Hb_000270_150 Hb_148262_020--Hb_001379_130 Hb_000736_010 Hb_000736_010 Hb_148262_020--Hb_000736_010 Hb_148262_020--Hb_000003_770 Hb_088496_010--Hb_004297_030 Hb_088496_010--Hb_094721_010 Hb_088496_010--Hb_012324_020 Hb_015091_010 Hb_015091_010 Hb_004297_030--Hb_015091_010 Hb_004297_030--Hb_094721_010 Hb_004297_030--Hb_012324_020 Hb_000348_040 Hb_000348_040 Hb_004297_030--Hb_000348_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.00828629
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0430361 0.0169313 0 0 0

CAGE analysis