Hb_001258_130

Information

Type -
Description -
Location Contig1258: 148257-155585
Sequence    

Annotation

kegg
ID rcu:RCOM_0188570
description Chromosome-associated kinesin KIF4A, putative
nr
ID XP_012079501.1
description PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
swissprot
ID Q86Y91
description Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF18B PE=1 SV=3
trembl
ID A0A067K7Q4
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_12608 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-like protein kif19

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07898: 148513-149664 , PASA_asmbl_07899: 149721-155742
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001258_130 0.0 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
2 Hb_001511_210 0.0698558935 - - PREDICTED: protein ESKIMO 1-like [Jatropha curcas]
3 Hb_016297_010 0.0739853716 - - PREDICTED: uncharacterized protein LOC105638665 [Jatropha curcas]
4 Hb_105148_020 0.0745912147 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
5 Hb_000139_040 0.0761241704 - - spermine synthase, putative [Ricinus communis]
6 Hb_002066_100 0.0777376344 - - PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
7 Hb_000722_030 0.0782725309 - - putative plant disease resistance family protein [Populus trichocarpa]
8 Hb_002518_040 0.0810776862 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
9 Hb_023582_010 0.0878336677 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002301_120 0.0901450783 - - PREDICTED: uncharacterized protein LOC105649581 [Jatropha curcas]
11 Hb_006620_030 0.0947930249 - - nitrate reductase, putative [Ricinus communis]
12 Hb_019053_040 0.0949521597 - - cytochrome P450, putative [Ricinus communis]
13 Hb_001958_040 0.0953477329 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]
14 Hb_003207_120 0.095750957 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
15 Hb_129956_010 0.0997560432 - - PREDICTED: serine/threonine-protein kinase SAPK2 [Eucalyptus grandis]
16 Hb_001439_050 0.1008084708 - - plastocyanin-like domain-containing family protein [Populus trichocarpa]
17 Hb_011671_050 0.1009485523 - - PREDICTED: F-box protein At5g07670 [Jatropha curcas]
18 Hb_000031_240 0.1029512133 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
19 Hb_001519_090 0.1038763255 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
20 Hb_000397_060 0.1048736465 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]

Gene co-expression network

sample Hb_001258_130 Hb_001258_130 Hb_001511_210 Hb_001511_210 Hb_001258_130--Hb_001511_210 Hb_016297_010 Hb_016297_010 Hb_001258_130--Hb_016297_010 Hb_105148_020 Hb_105148_020 Hb_001258_130--Hb_105148_020 Hb_000139_040 Hb_000139_040 Hb_001258_130--Hb_000139_040 Hb_002066_100 Hb_002066_100 Hb_001258_130--Hb_002066_100 Hb_000722_030 Hb_000722_030 Hb_001258_130--Hb_000722_030 Hb_002301_120 Hb_002301_120 Hb_001511_210--Hb_002301_120 Hb_001511_210--Hb_002066_100 Hb_001511_210--Hb_016297_010 Hb_001511_210--Hb_000722_030 Hb_002374_470 Hb_002374_470 Hb_001511_210--Hb_002374_470 Hb_023827_030 Hb_023827_030 Hb_016297_010--Hb_023827_030 Hb_023582_010 Hb_023582_010 Hb_016297_010--Hb_023582_010 Hb_016297_010--Hb_000722_030 Hb_019053_040 Hb_019053_040 Hb_016297_010--Hb_019053_040 Hb_016297_010--Hb_105148_020 Hb_105148_020--Hb_019053_040 Hb_006620_030 Hb_006620_030 Hb_105148_020--Hb_006620_030 Hb_001166_010 Hb_001166_010 Hb_105148_020--Hb_001166_010 Hb_105148_020--Hb_023582_010 Hb_105148_020--Hb_023827_030 Hb_049846_010 Hb_049846_010 Hb_000139_040--Hb_049846_010 Hb_129956_010 Hb_129956_010 Hb_000139_040--Hb_129956_010 Hb_023640_020 Hb_023640_020 Hb_000139_040--Hb_023640_020 Hb_000031_240 Hb_000031_240 Hb_000139_040--Hb_000031_240 Hb_005357_140 Hb_005357_140 Hb_000139_040--Hb_005357_140 Hb_002066_100--Hb_000722_030 Hb_002066_100--Hb_019053_040 Hb_002066_100--Hb_023582_010 Hb_027684_010 Hb_027684_010 Hb_002066_100--Hb_027684_010 Hb_002518_040 Hb_002518_040 Hb_000722_030--Hb_002518_040 Hb_000722_030--Hb_023582_010 Hb_000722_030--Hb_019053_040 Hb_000722_030--Hb_027684_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0532673 0.516692 11.9626 5.65437 0.00794099 0.00747054
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0180046 0 0 0.275708 4.54551

CAGE analysis