Hb_001259_030

Information

Type -
Description -
Location Contig1259: 33891-35090
Sequence    

Annotation

kegg
ID rcu:RCOM_0003550
description hypothetical protein
nr
ID XP_012081168.1
description PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K215
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17013 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001259_030 0.0 - - PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]
2 Hb_000640_210 0.0946247325 - - hypothetical protein JCGZ_14045 [Jatropha curcas]
3 Hb_060437_010 0.0995442895 - - E3 ubiquitin protein ligase RIE1 [Morus notabilis]
4 Hb_005028_010 0.1014638516 - - interferon-induced guanylate-binding protein, putative [Ricinus communis]
5 Hb_000613_020 0.1026436059 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
6 Hb_001140_080 0.107616454 - - PREDICTED: membrane steroid-binding protein 2-like [Jatropha curcas]
7 Hb_003050_090 0.108894024 - - lupus la ribonucleoprotein, putative [Ricinus communis]
8 Hb_001178_060 0.1133590925 - - PREDICTED: protein BUD31 homolog 2 isoform X1 [Jatropha curcas]
9 Hb_007809_060 0.1195324854 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH3 [Jatropha curcas]
10 Hb_025048_040 0.119871013 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
11 Hb_012760_200 0.1220029189 - - protein phsophatase-2a, putative [Ricinus communis]
12 Hb_001034_020 0.1228461633 - - PREDICTED: uncharacterized protein LOC105641929 [Jatropha curcas]
13 Hb_000076_290 0.1244226427 - - translation factor sui1, putative [Ricinus communis]
14 Hb_000322_170 0.125045441 - - PREDICTED: nucleosome assembly protein 1;3 [Jatropha curcas]
15 Hb_000025_750 0.1251749259 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
16 Hb_000365_350 0.1299125729 - - PREDICTED: uncharacterized protein LOC105649068 [Jatropha curcas]
17 Hb_007382_040 0.1302324342 - - uncharacterized LOC105644857 [Jatropha curcas]
18 Hb_005016_030 0.1314601316 - - hypothetical protein JCGZ_16549 [Jatropha curcas]
19 Hb_001227_110 0.1319992644 - - U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
20 Hb_001523_010 0.1341763267 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_25496 [Jatropha curcas]

Gene co-expression network

sample Hb_001259_030 Hb_001259_030 Hb_000640_210 Hb_000640_210 Hb_001259_030--Hb_000640_210 Hb_060437_010 Hb_060437_010 Hb_001259_030--Hb_060437_010 Hb_005028_010 Hb_005028_010 Hb_001259_030--Hb_005028_010 Hb_000613_020 Hb_000613_020 Hb_001259_030--Hb_000613_020 Hb_001140_080 Hb_001140_080 Hb_001259_030--Hb_001140_080 Hb_003050_090 Hb_003050_090 Hb_001259_030--Hb_003050_090 Hb_000322_170 Hb_000322_170 Hb_000640_210--Hb_000322_170 Hb_000076_290 Hb_000076_290 Hb_000640_210--Hb_000076_290 Hb_000174_200 Hb_000174_200 Hb_000640_210--Hb_000174_200 Hb_000640_210--Hb_005028_010 Hb_012760_200 Hb_012760_200 Hb_000640_210--Hb_012760_200 Hb_001178_060 Hb_001178_060 Hb_000640_210--Hb_001178_060 Hb_001034_020 Hb_001034_020 Hb_060437_010--Hb_001034_020 Hb_060437_010--Hb_003050_090 Hb_060437_010--Hb_012760_200 Hb_060437_010--Hb_001178_060 Hb_000025_750 Hb_000025_750 Hb_060437_010--Hb_000025_750 Hb_060437_010--Hb_000640_210 Hb_005028_010--Hb_012760_200 Hb_000212_280 Hb_000212_280 Hb_005028_010--Hb_000212_280 Hb_000573_040 Hb_000573_040 Hb_005028_010--Hb_000573_040 Hb_025048_040 Hb_025048_040 Hb_005028_010--Hb_025048_040 Hb_005028_010--Hb_001140_080 Hb_000613_020--Hb_000025_750 Hb_000613_020--Hb_060437_010 Hb_004032_460 Hb_004032_460 Hb_000613_020--Hb_004032_460 Hb_000613_020--Hb_005028_010 Hb_001348_140 Hb_001348_140 Hb_000613_020--Hb_001348_140 Hb_000282_150 Hb_000282_150 Hb_001140_080--Hb_000282_150 Hb_012807_120 Hb_012807_120 Hb_001140_080--Hb_012807_120 Hb_000270_450 Hb_000270_450 Hb_001140_080--Hb_000270_450 Hb_006478_070 Hb_006478_070 Hb_001140_080--Hb_006478_070 Hb_003506_040 Hb_003506_040 Hb_001140_080--Hb_003506_040 Hb_003050_090--Hb_001140_080 Hb_003050_090--Hb_001034_020 Hb_003050_090--Hb_001178_060 Hb_000953_140 Hb_000953_140 Hb_003050_090--Hb_000953_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
153.465 35.4166 3.45202 8.33856 73.7591 97.2688
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
40.3676 14.9355 17.7509 11.9787 4.88743

CAGE analysis