Hb_001263_020

Information

Type -
Description -
Location Contig1263: 37142-38992
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001263_020 0.0 - - -
2 Hb_012656_010 0.0012069951 - - -
3 Hb_000487_390 0.0048525226 - - PREDICTED: putative pumilio homolog 21 [Jatropha curcas]
4 Hb_003812_010 0.0109216366 - - -
5 Hb_001754_220 0.0638011297 - - -
6 Hb_019654_160 0.1289165165 - - Zinc finger protein GIS2 [Medicago truncatula]
7 Hb_012799_090 0.1303537643 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like [Jatropha curcas]
8 Hb_000866_160 0.138004306 - - PREDICTED: elicitor-responsive protein 3 [Populus euphratica]
9 Hb_031089_060 0.1395779908 - - -
10 Hb_001798_040 0.2691729187 transcription factor TF Family: NAC hypothetical protein ARALYDRAFT_918808 [Arabidopsis lyrata subsp. lyrata]
11 Hb_000982_030 0.3367221419 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005524_010 0.3530341788 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
13 Hb_000326_020 0.3590390809 - - -
14 Hb_000330_180 0.3632704409 - - -
15 Hb_001541_240 0.3643194922 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007189_020 0.3882487172 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
17 Hb_000853_380 0.4099619469 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000917_250 0.4105784723 - - PREDICTED: coiled-coil domain-containing protein 130-like [Populus euphratica]
19 Hb_002498_090 0.4141505522 - - -
20 Hb_156635_050 0.4152148696 - - hypothetical protein JCGZ_01613 [Jatropha curcas]

Gene co-expression network

sample Hb_001263_020 Hb_001263_020 Hb_012656_010 Hb_012656_010 Hb_001263_020--Hb_012656_010 Hb_000487_390 Hb_000487_390 Hb_001263_020--Hb_000487_390 Hb_003812_010 Hb_003812_010 Hb_001263_020--Hb_003812_010 Hb_001754_220 Hb_001754_220 Hb_001263_020--Hb_001754_220 Hb_019654_160 Hb_019654_160 Hb_001263_020--Hb_019654_160 Hb_012799_090 Hb_012799_090 Hb_001263_020--Hb_012799_090 Hb_012656_010--Hb_000487_390 Hb_012656_010--Hb_003812_010 Hb_012656_010--Hb_001754_220 Hb_012656_010--Hb_019654_160 Hb_012656_010--Hb_012799_090 Hb_000487_390--Hb_003812_010 Hb_000487_390--Hb_001754_220 Hb_000866_160 Hb_000866_160 Hb_000487_390--Hb_000866_160 Hb_000487_390--Hb_019654_160 Hb_003812_010--Hb_001754_220 Hb_003812_010--Hb_019654_160 Hb_003812_010--Hb_012799_090 Hb_001754_220--Hb_019654_160 Hb_001754_220--Hb_012799_090 Hb_019654_160--Hb_012799_090 Hb_012799_090--Hb_000487_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0701983 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.128593 0 0 0

CAGE analysis