Hb_001263_030

Information

Type -
Description -
Location Contig1263: 40966-41967
Sequence    

Annotation

kegg
ID rcu:RCOM_1313670
description electron transporter, putative
nr
ID XP_012086623.1
description PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
swissprot
ID Q9FLE8
description Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1
trembl
ID A0A067JMZ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20373 PE=4 SV=1
Gene Ontology
ID GO:0005623
description glutaredoxin family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07962: 40959-41381 , PASA_asmbl_07963: 41491-41732
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001263_030 0.0 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
2 Hb_000030_080 0.0766541999 - - PREDICTED: uncharacterized protein LOC105632640 [Jatropha curcas]
3 Hb_004531_060 0.0769600303 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
4 Hb_020025_030 0.0821241591 transcription factor TF Family: PHD PREDICTED: protein Jade-1 [Populus euphratica]
5 Hb_000140_200 0.0866611255 - - PREDICTED: uncharacterized protein LOC105642928 [Jatropha curcas]
6 Hb_005332_030 0.0909845067 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001454_270 0.0938545275 - - PREDICTED: condensin-2 complex subunit D3 isoform X2 [Jatropha curcas]
8 Hb_000094_230 0.0967198523 - - hypothetical protein JCGZ_04416 [Jatropha curcas]
9 Hb_006588_100 0.0992151137 - - conserved hypothetical protein [Ricinus communis]
10 Hb_159809_040 0.1000691779 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003656_080 0.1004186377 - - PREDICTED: corepressor interacting with RBPJ 1-like [Jatropha curcas]
12 Hb_000977_190 0.1048390541 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000260_670 0.1097139571 - - PREDICTED: serine/threonine-protein kinase TIO isoform X1 [Jatropha curcas]
14 Hb_002700_030 0.109739933 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
15 Hb_003902_070 0.1099679439 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003106_090 0.1139296965 transcription factor TF Family: E2F-DP E2F, putative [Ricinus communis]
17 Hb_000535_040 0.1140918519 - - PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]
18 Hb_000592_100 0.1153454693 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
19 Hb_000272_010 0.1166747521 - - PREDICTED: DNA replication licensing factor MCM5 [Jatropha curcas]
20 Hb_080147_070 0.1171959548 - - Rop5 [Hevea brasiliensis]

Gene co-expression network

sample Hb_001263_030 Hb_001263_030 Hb_000030_080 Hb_000030_080 Hb_001263_030--Hb_000030_080 Hb_004531_060 Hb_004531_060 Hb_001263_030--Hb_004531_060 Hb_020025_030 Hb_020025_030 Hb_001263_030--Hb_020025_030 Hb_000140_200 Hb_000140_200 Hb_001263_030--Hb_000140_200 Hb_005332_030 Hb_005332_030 Hb_001263_030--Hb_005332_030 Hb_001454_270 Hb_001454_270 Hb_001263_030--Hb_001454_270 Hb_003902_070 Hb_003902_070 Hb_000030_080--Hb_003902_070 Hb_004592_030 Hb_004592_030 Hb_000030_080--Hb_004592_030 Hb_000030_080--Hb_001454_270 Hb_001076_010 Hb_001076_010 Hb_000030_080--Hb_001076_010 Hb_004197_020 Hb_004197_020 Hb_000030_080--Hb_004197_020 Hb_003656_080 Hb_003656_080 Hb_004531_060--Hb_003656_080 Hb_004531_060--Hb_020025_030 Hb_004531_060--Hb_000140_200 Hb_006588_100 Hb_006588_100 Hb_004531_060--Hb_006588_100 Hb_001950_090 Hb_001950_090 Hb_004531_060--Hb_001950_090 Hb_020025_030--Hb_000140_200 Hb_000094_230 Hb_000094_230 Hb_020025_030--Hb_000094_230 Hb_020025_030--Hb_003656_080 Hb_000977_190 Hb_000977_190 Hb_020025_030--Hb_000977_190 Hb_000140_200--Hb_006588_100 Hb_000140_200--Hb_000094_230 Hb_000140_200--Hb_003656_080 Hb_000140_200--Hb_000977_190 Hb_159809_040 Hb_159809_040 Hb_005332_030--Hb_159809_040 Hb_005332_030--Hb_000977_190 Hb_000522_160 Hb_000522_160 Hb_005332_030--Hb_000522_160 Hb_005332_030--Hb_003656_080 Hb_006810_040 Hb_006810_040 Hb_005332_030--Hb_006810_040 Hb_001454_270--Hb_003902_070 Hb_002700_030 Hb_002700_030 Hb_001454_270--Hb_002700_030 Hb_003106_090 Hb_003106_090 Hb_001454_270--Hb_003106_090 Hb_001454_270--Hb_004592_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.129092 3.46083 2.621 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.00722 0.325384

CAGE analysis