Hb_001265_010

Information

Type transcription factor
Description TF Family: NAC
Location Contig1265: 9736-14678
Sequence    

Annotation

kegg
ID cic:CICLE_v10010524mg
description hypothetical protein
nr
ID AGL39713.1
description NAC transcription factor 057 [Jatropha curcas]
swissprot
ID A0SPJ6
description NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum GN=NAM-B2 PE=2 SV=1
trembl
ID R4N7R6
description NAC transcription factor 057 OS=Jatropha curcas GN=JCGZ_08700 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nac domain-containing protein 67-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001265_010 0.0 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]
2 Hb_142392_010 0.2389570499 - - PREDICTED: uncharacterized protein LOC105628741 [Jatropha curcas]
3 Hb_001495_060 0.2743402025 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
4 Hb_010680_010 0.2936418431 - - -
5 Hb_000538_150 0.2952167413 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
6 Hb_002685_180 0.2982007391 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
7 Hb_032202_030 0.3104865698 - - -
8 Hb_007904_270 0.311144777 - - -
9 Hb_028365_010 0.3122583163 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
10 Hb_001141_400 0.3141923008 - - hypothetical protein B456_007G2854002, partial [Gossypium raimondii]
11 Hb_000445_330 0.3152381274 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001143_010 0.3171320718 - - -
13 Hb_000453_210 0.3210195142 - - hypothetical protein PHAVU_006G019800g [Phaseolus vulgaris]
14 Hb_145761_010 0.3266235697 - - -
15 Hb_116195_010 0.3310293142 - - -
16 Hb_159085_010 0.3313804208 - - -
17 Hb_000599_050 0.3331865265 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
18 Hb_000275_040 0.3389488629 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
19 Hb_065642_010 0.3402858041 - - -
20 Hb_000088_060 0.3409445578 - - -

Gene co-expression network

sample Hb_001265_010 Hb_001265_010 Hb_142392_010 Hb_142392_010 Hb_001265_010--Hb_142392_010 Hb_001495_060 Hb_001495_060 Hb_001265_010--Hb_001495_060 Hb_010680_010 Hb_010680_010 Hb_001265_010--Hb_010680_010 Hb_000538_150 Hb_000538_150 Hb_001265_010--Hb_000538_150 Hb_002685_180 Hb_002685_180 Hb_001265_010--Hb_002685_180 Hb_032202_030 Hb_032202_030 Hb_001265_010--Hb_032202_030 Hb_142392_010--Hb_010680_010 Hb_116195_010 Hb_116195_010 Hb_142392_010--Hb_116195_010 Hb_080083_010 Hb_080083_010 Hb_142392_010--Hb_080083_010 Hb_145761_010 Hb_145761_010 Hb_142392_010--Hb_145761_010 Hb_000088_060 Hb_000088_060 Hb_142392_010--Hb_000088_060 Hb_000453_210 Hb_000453_210 Hb_001495_060--Hb_000453_210 Hb_000529_240 Hb_000529_240 Hb_001495_060--Hb_000529_240 Hb_001495_060--Hb_002685_180 Hb_003209_030 Hb_003209_030 Hb_001495_060--Hb_003209_030 Hb_001143_010 Hb_001143_010 Hb_001495_060--Hb_001143_010 Hb_001047_140 Hb_001047_140 Hb_001495_060--Hb_001047_140 Hb_001158_030 Hb_001158_030 Hb_010680_010--Hb_001158_030 Hb_015456_020 Hb_015456_020 Hb_010680_010--Hb_015456_020 Hb_004374_060 Hb_004374_060 Hb_010680_010--Hb_004374_060 Hb_010680_010--Hb_145761_010 Hb_005214_110 Hb_005214_110 Hb_010680_010--Hb_005214_110 Hb_000614_330 Hb_000614_330 Hb_000538_150--Hb_000614_330 Hb_007044_210 Hb_007044_210 Hb_000538_150--Hb_007044_210 Hb_027380_040 Hb_027380_040 Hb_000538_150--Hb_027380_040 Hb_000613_200 Hb_000613_200 Hb_000538_150--Hb_000613_200 Hb_005298_040 Hb_005298_040 Hb_000538_150--Hb_005298_040 Hb_005545_030 Hb_005545_030 Hb_000538_150--Hb_005545_030 Hb_002685_180--Hb_000453_210 Hb_007904_090 Hb_007904_090 Hb_002685_180--Hb_007904_090 Hb_011242_030 Hb_011242_030 Hb_002685_180--Hb_011242_030 Hb_000376_160 Hb_000376_160 Hb_002685_180--Hb_000376_160 Hb_019033_010 Hb_019033_010 Hb_002685_180--Hb_019033_010 Hb_000803_040 Hb_000803_040 Hb_032202_030--Hb_000803_040 Hb_148891_010 Hb_148891_010 Hb_032202_030--Hb_148891_010 Hb_000445_190 Hb_000445_190 Hb_032202_030--Hb_000445_190 Hb_000567_040 Hb_000567_040 Hb_032202_030--Hb_000567_040 Hb_032202_030--Hb_002685_180 Hb_032202_030--Hb_000529_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0208926 0.007696 0 0 0.0180735 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0423861 0.0166756 0 0 0

CAGE analysis