Hb_001266_010

Information

Type -
Description -
Location Contig1266: 2467-11919
Sequence    

Annotation

kegg
ID rcu:RCOM_0692670
description Jasmonate O-methyltransferase, putative (EC:2.1.1.141)
nr
ID XP_011658495.1
description PREDICTED: uncharacterized protein LOC101206474 [Cucumis sativus]
swissprot
ID Q9SPV4
description Salicylate carboxymethyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1
trembl
ID B9S844
description Jasmonate O-methyltransferase, putative OS=Ricinus communis GN=RCOM_0692670 PE=4 SV=1
Gene Ontology
ID GO:0030795
description salicylate o-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08015: 2497-5077
cDNA
(Sanger)
(ID:Location)		 008_B21.ab1: 2497-4196 , 052_O01.ab1: 2497-4137

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001266_010 0.0 - - PREDICTED: uncharacterized protein LOC101206474 [Cucumis sativus]
2 Hb_000005_060 0.0616181846 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
3 Hb_034235_010 0.0618971471 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
4 Hb_011013_040 0.0619973227 transcription factor TF Family: C2C2-YABBY unknown [Populus trichocarpa]
5 Hb_001975_120 0.0626502509 - - chlorophyll a/b binding protein type II [Glycine max]
6 Hb_000069_440 0.0634909616 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
7 Hb_009476_030 0.0657309069 - - fatty acid desaturase [Manihot esculenta]
8 Hb_000608_270 0.0679791202 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003038_230 0.0682547057 - - PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Jatropha curcas]
10 Hb_000282_020 0.0698864539 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
11 Hb_004223_150 0.0757267513 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Jatropha curcas]
12 Hb_023582_010 0.0785968318 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004411_010 0.0801495243 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
14 Hb_041433_010 0.0813694816 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
15 Hb_005345_020 0.0816127355 - - Root phototropism protein, putative [Ricinus communis]
16 Hb_012395_090 0.082232537 - - PREDICTED: protein PROTON GRADIENT REGULATION 5, chloroplastic [Jatropha curcas]
17 Hb_019053_040 0.0833752187 - - cytochrome P450, putative [Ricinus communis]
18 Hb_002702_010 0.0843460355 - - carbohydrate binding protein, putative [Ricinus communis]
19 Hb_000697_030 0.0844833727 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Pyrus x bretschneideri]
20 Hb_000530_040 0.0847423146 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001266_010 Hb_001266_010 Hb_000005_060 Hb_000005_060 Hb_001266_010--Hb_000005_060 Hb_034235_010 Hb_034235_010 Hb_001266_010--Hb_034235_010 Hb_011013_040 Hb_011013_040 Hb_001266_010--Hb_011013_040 Hb_001975_120 Hb_001975_120 Hb_001266_010--Hb_001975_120 Hb_000069_440 Hb_000069_440 Hb_001266_010--Hb_000069_440 Hb_009476_030 Hb_009476_030 Hb_001266_010--Hb_009476_030 Hb_000282_020 Hb_000282_020 Hb_000005_060--Hb_000282_020 Hb_000005_060--Hb_000069_440 Hb_023582_010 Hb_023582_010 Hb_000005_060--Hb_023582_010 Hb_023827_030 Hb_023827_030 Hb_000005_060--Hb_023827_030 Hb_004411_010 Hb_004411_010 Hb_000005_060--Hb_004411_010 Hb_149644_030 Hb_149644_030 Hb_034235_010--Hb_149644_030 Hb_041433_010 Hb_041433_010 Hb_034235_010--Hb_041433_010 Hb_034235_010--Hb_009476_030 Hb_002704_060 Hb_002704_060 Hb_034235_010--Hb_002704_060 Hb_000152_350 Hb_000152_350 Hb_034235_010--Hb_000152_350 Hb_012395_090 Hb_012395_090 Hb_011013_040--Hb_012395_090 Hb_000155_020 Hb_000155_020 Hb_011013_040--Hb_000155_020 Hb_002702_010 Hb_002702_010 Hb_011013_040--Hb_002702_010 Hb_001159_050 Hb_001159_050 Hb_011013_040--Hb_001159_050 Hb_003038_230 Hb_003038_230 Hb_011013_040--Hb_003038_230 Hb_000530_040 Hb_000530_040 Hb_001975_120--Hb_000530_040 Hb_000697_030 Hb_000697_030 Hb_001975_120--Hb_000697_030 Hb_005345_020 Hb_005345_020 Hb_001975_120--Hb_005345_020 Hb_003573_030 Hb_003573_030 Hb_001975_120--Hb_003573_030 Hb_001975_120--Hb_009476_030 Hb_001424_010 Hb_001424_010 Hb_001975_120--Hb_001424_010 Hb_000069_440--Hb_004411_010 Hb_000069_440--Hb_000282_020 Hb_007853_030 Hb_007853_030 Hb_000069_440--Hb_007853_030 Hb_000069_440--Hb_023827_030 Hb_000069_220 Hb_000069_220 Hb_000069_440--Hb_000069_220 Hb_009476_030--Hb_005345_020 Hb_002042_090 Hb_002042_090 Hb_009476_030--Hb_002042_090 Hb_001675_090 Hb_001675_090 Hb_009476_030--Hb_001675_090 Hb_009476_030--Hb_041433_010 Hb_001789_220 Hb_001789_220 Hb_009476_030--Hb_001789_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.6908 22.8674 10.081 0.00886586 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0215181 0 0 0.404 18.0564

CAGE analysis