Hb_001266_080

Information

Type -
Description -
Location Contig1266: 75670-82131
Sequence    

Annotation

kegg
ID gmx:100784099
description eukaryotic translation initiation factor 2 subunit 3-like
nr
ID XP_012072620.1
description PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Jatropha curcas]
swissprot
ID P41091
description Eukaryotic translation initiation factor 2 subunit 3 OS=Homo sapiens GN=EIF2S3 PE=1 SV=3
trembl
ID A0A067KNV0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06689 PE=4 SV=1
Gene Ontology
ID GO:0003743
description eukaryotic translation initiation factor 2 subunit gamma-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08029: 75786-82142
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001266_080 0.0 - - PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Jatropha curcas]
2 Hb_071736_010 0.0755017345 - - Metallopeptidase M24 family protein isoform 1 [Theobroma cacao]
3 Hb_001124_080 0.0840350118 - - RecName: Full=Acyl carrier protein 2, chloroplastic; Short=ACP; Flags: Precursor [Cuphea lanceolata]
4 Hb_007426_030 0.0846251563 - - PREDICTED: pentatricopeptide repeat-containing protein At2g34400 [Jatropha curcas]
5 Hb_004055_140 0.0853004943 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
6 Hb_009117_030 0.0869597867 - - PREDICTED: histidine protein methyltransferase 1 homolog isoform X2 [Jatropha curcas]
7 Hb_000914_070 0.094360814 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Jatropha curcas]
8 Hb_148644_010 0.0946769959 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
9 Hb_001344_010 0.0959727753 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI11 [Jatropha curcas]
10 Hb_000103_180 0.0959851468 - - PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
11 Hb_005489_110 0.0968188529 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
12 Hb_023001_060 0.0971597655 - - PREDICTED: importin-11 [Jatropha curcas]
13 Hb_000284_110 0.0976303429 - - PREDICTED: bromodomain-containing protein 3 [Jatropha curcas]
14 Hb_004072_020 0.0980702205 - - PREDICTED: uncharacterized protein LOC105635274 [Jatropha curcas]
15 Hb_001019_060 0.0987682669 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
16 Hb_003195_060 0.0989691369 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
17 Hb_000364_150 0.0998550733 - - -
18 Hb_011689_020 0.1001793678 - - protein phosphatase 2c, putative [Ricinus communis]
19 Hb_005883_050 0.1014142776 - - PREDICTED: transportin-3 [Jatropha curcas]
20 Hb_002616_050 0.1018900753 - - PREDICTED: traB domain-containing protein [Jatropha curcas]

Gene co-expression network

sample Hb_001266_080 Hb_001266_080 Hb_071736_010 Hb_071736_010 Hb_001266_080--Hb_071736_010 Hb_001124_080 Hb_001124_080 Hb_001266_080--Hb_001124_080 Hb_007426_030 Hb_007426_030 Hb_001266_080--Hb_007426_030 Hb_004055_140 Hb_004055_140 Hb_001266_080--Hb_004055_140 Hb_009117_030 Hb_009117_030 Hb_001266_080--Hb_009117_030 Hb_000914_070 Hb_000914_070 Hb_001266_080--Hb_000914_070 Hb_005883_050 Hb_005883_050 Hb_071736_010--Hb_005883_050 Hb_005754_060 Hb_005754_060 Hb_071736_010--Hb_005754_060 Hb_000023_140 Hb_000023_140 Hb_071736_010--Hb_000023_140 Hb_002616_050 Hb_002616_050 Hb_071736_010--Hb_002616_050 Hb_001855_010 Hb_001855_010 Hb_071736_010--Hb_001855_010 Hb_000284_110 Hb_000284_110 Hb_001124_080--Hb_000284_110 Hb_001124_080--Hb_071736_010 Hb_004072_020 Hb_004072_020 Hb_001124_080--Hb_004072_020 Hb_001124_080--Hb_004055_140 Hb_001124_080--Hb_002616_050 Hb_000103_180 Hb_000103_180 Hb_007426_030--Hb_000103_180 Hb_001019_060 Hb_001019_060 Hb_007426_030--Hb_001019_060 Hb_000808_230 Hb_000808_230 Hb_007426_030--Hb_000808_230 Hb_000483_200 Hb_000483_200 Hb_007426_030--Hb_000483_200 Hb_002079_010 Hb_002079_010 Hb_007426_030--Hb_002079_010 Hb_006400_060 Hb_006400_060 Hb_007426_030--Hb_006400_060 Hb_004055_140--Hb_002616_050 Hb_028872_140 Hb_028872_140 Hb_004055_140--Hb_028872_140 Hb_033642_010 Hb_033642_010 Hb_004055_140--Hb_033642_010 Hb_005117_010 Hb_005117_010 Hb_004055_140--Hb_005117_010 Hb_001454_140 Hb_001454_140 Hb_004055_140--Hb_001454_140 Hb_005016_050 Hb_005016_050 Hb_009117_030--Hb_005016_050 Hb_000889_020 Hb_000889_020 Hb_009117_030--Hb_000889_020 Hb_003333_060 Hb_003333_060 Hb_009117_030--Hb_003333_060 Hb_032458_010 Hb_032458_010 Hb_009117_030--Hb_032458_010 Hb_000166_110 Hb_000166_110 Hb_009117_030--Hb_000166_110 Hb_000364_150 Hb_000364_150 Hb_000914_070--Hb_000364_150 Hb_012490_040 Hb_012490_040 Hb_000914_070--Hb_012490_040 Hb_000914_070--Hb_005117_010 Hb_000347_200 Hb_000347_200 Hb_000914_070--Hb_000347_200 Hb_000914_070--Hb_004055_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
79.8382 23.5423 19.3289 56.623 73.291 170.146
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
92.3153 69.0102 106.224 65.2761 57.8079

CAGE analysis