Hb_001268_130

Information

Type -
Description -
Location Contig1268: 130778-132166
Sequence    

Annotation

kegg
ID rcu:RCOM_1446190
description hypothetical protein
nr
ID KDP41819.1
description hypothetical protein JCGZ_26837 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCK4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26837 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001268_130 0.0 - - hypothetical protein JCGZ_26837 [Jatropha curcas]
2 Hb_026527_020 0.2384620966 - - PREDICTED: putative methyltransferase DDB_G0268948 [Jatropha curcas]
3 Hb_007101_230 0.261146839 - - leucine rich repeat-containing protein, putative [Ricinus communis]
4 Hb_007072_020 0.2653672713 transcription factor TF Family: bHLH lMYC5 [Hevea brasiliensis]
5 Hb_000032_580 0.2695163267 - - hypothetical protein RCOM_1311780 [Ricinus communis]
6 Hb_003038_170 0.2834404792 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000056_330 0.28907338 - - unnamed protein product [Vitis vinifera]
8 Hb_000140_160 0.2906681539 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
9 Hb_000926_130 0.2939342257 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_008014_030 0.2997281767 - - Aquaporin NIP1.1, putative [Ricinus communis]
11 Hb_000816_120 0.3062994056 - - PREDICTED: uncharacterized protein LOC105649214 [Jatropha curcas]
12 Hb_000675_060 0.3082507517 - - cytochrome P450, putative [Ricinus communis]
13 Hb_006355_030 0.3104660612 transcription factor TF Family: Orphans sensory transduction histidine kinase bacterial, putative [Ricinus communis]
14 Hb_007894_250 0.3107975131 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
15 Hb_183623_010 0.3144600963 - - aldo-keto reductase, putative [Ricinus communis]
16 Hb_000157_130 0.3179793982 - - PREDICTED: cinnamoyl-CoA reductase 1-like isoform X2 [Populus euphratica]
17 Hb_000317_360 0.3196499979 - - PREDICTED: GDSL esterase/lipase At5g08460 [Jatropha curcas]
18 Hb_085636_010 0.3224003089 - - PREDICTED: uncharacterized protein LOC105636643 [Jatropha curcas]
19 Hb_006420_090 0.3225603896 - - PREDICTED: zinc finger protein 5 [Jatropha curcas]
20 Hb_000496_090 0.3253733193 - - PREDICTED: inhibitor of trypsin and hageman factor-like [Gossypium raimondii]

Gene co-expression network

sample Hb_001268_130 Hb_001268_130 Hb_026527_020 Hb_026527_020 Hb_001268_130--Hb_026527_020 Hb_007101_230 Hb_007101_230 Hb_001268_130--Hb_007101_230 Hb_007072_020 Hb_007072_020 Hb_001268_130--Hb_007072_020 Hb_000032_580 Hb_000032_580 Hb_001268_130--Hb_000032_580 Hb_003038_170 Hb_003038_170 Hb_001268_130--Hb_003038_170 Hb_000056_330 Hb_000056_330 Hb_001268_130--Hb_000056_330 Hb_006420_090 Hb_006420_090 Hb_026527_020--Hb_006420_090 Hb_007885_050 Hb_007885_050 Hb_026527_020--Hb_007885_050 Hb_011016_010 Hb_011016_010 Hb_026527_020--Hb_011016_010 Hb_000836_490 Hb_000836_490 Hb_026527_020--Hb_000836_490 Hb_026527_020--Hb_003038_170 Hb_183623_010 Hb_183623_010 Hb_007101_230--Hb_183623_010 Hb_008014_030 Hb_008014_030 Hb_007101_230--Hb_008014_030 Hb_007101_230--Hb_026527_020 Hb_000297_020 Hb_000297_020 Hb_007101_230--Hb_000297_020 Hb_028486_070 Hb_028486_070 Hb_007101_230--Hb_028486_070 Hb_000926_130 Hb_000926_130 Hb_007072_020--Hb_000926_130 Hb_000500_110 Hb_000500_110 Hb_007072_020--Hb_000500_110 Hb_007072_020--Hb_000056_330 Hb_007520_040 Hb_007520_040 Hb_007072_020--Hb_007520_040 Hb_007894_250 Hb_007894_250 Hb_007072_020--Hb_007894_250 Hb_006355_030 Hb_006355_030 Hb_007072_020--Hb_006355_030 Hb_007101_290 Hb_007101_290 Hb_000032_580--Hb_007101_290 Hb_000836_230 Hb_000836_230 Hb_000032_580--Hb_000836_230 Hb_000140_160 Hb_000140_160 Hb_000032_580--Hb_000140_160 Hb_000256_100 Hb_000256_100 Hb_000032_580--Hb_000256_100 Hb_000032_580--Hb_026527_020 Hb_138710_010 Hb_138710_010 Hb_003038_170--Hb_138710_010 Hb_002798_010 Hb_002798_010 Hb_003038_170--Hb_002798_010 Hb_094437_060 Hb_094437_060 Hb_003038_170--Hb_094437_060 Hb_003038_170--Hb_000032_580 Hb_000056_330--Hb_000926_130 Hb_000056_330--Hb_007894_250 Hb_003096_050 Hb_003096_050 Hb_000056_330--Hb_003096_050 Hb_001190_060 Hb_001190_060 Hb_000056_330--Hb_001190_060 Hb_000975_150 Hb_000975_150 Hb_000056_330--Hb_000975_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.160912 0.0173808 0 0.390854 0.0174462 0.176019
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.56296 0.407412 4.0058 0

CAGE analysis