Hb_001268_210

Information

Type -
Description -
Location Contig1268: 207529-213316
Sequence    

Annotation

kegg
ID rcu:RCOM_1446770
description zinc finger protein, putative (EC:1.3.1.74)
nr
ID XP_002512891.1
description zinc finger protein, putative [Ricinus communis]
swissprot
ID Q0WQK2
description Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana GN=PAT07 PE=1 SV=1
trembl
ID B9RH32
description S-acyltransferase OS=Ricinus communis GN=RCOM_1446770 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable protein s-acyltransferase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08109: 207587-213224
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001268_210 0.0 - - zinc finger protein, putative [Ricinus communis]
2 Hb_003216_110 0.0899281375 - - PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Jatropha curcas]
3 Hb_002027_220 0.0971467344 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
4 Hb_004143_070 0.1023964288 - - cytochrome P450, putative [Ricinus communis]
5 Hb_000165_130 0.104273055 - - PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
6 Hb_000197_210 0.1050021657 - - phosphatidylinositol transporter, putative [Ricinus communis]
7 Hb_002475_050 0.1069298172 - - hypothetical protein JCGZ_22540 [Jatropha curcas]
8 Hb_012977_010 0.1072179385 - - PREDICTED: uncharacterized protein LOC105131558 [Populus euphratica]
9 Hb_079326_010 0.107882765 - - PREDICTED: uncharacterized protein LOC105630719 isoform X1 [Jatropha curcas]
10 Hb_002739_080 0.1079177789 - - cystathionine beta-lyase, putative [Ricinus communis]
11 Hb_002159_040 0.1139657648 - - hypothetical protein PRUPE_ppa001563mg [Prunus persica]
12 Hb_001969_040 0.1142422781 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
13 Hb_001863_110 0.1142621028 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
14 Hb_002493_090 0.1203316845 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X2 [Jatropha curcas]
15 Hb_004678_060 0.1210738682 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Jatropha curcas]
16 Hb_000347_080 0.1223540824 - - PREDICTED: 25.3 kDa vesicle transport protein [Jatropha curcas]
17 Hb_000372_040 0.1228143485 - - WD-repeat protein, putative [Ricinus communis]
18 Hb_008406_140 0.1231702424 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
19 Hb_000497_230 0.1239128527 - - PREDICTED: probable protein S-acyltransferase 6 [Jatropha curcas]
20 Hb_001040_120 0.1244027019 - - allantoinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001268_210 Hb_001268_210 Hb_003216_110 Hb_003216_110 Hb_001268_210--Hb_003216_110 Hb_002027_220 Hb_002027_220 Hb_001268_210--Hb_002027_220 Hb_004143_070 Hb_004143_070 Hb_001268_210--Hb_004143_070 Hb_000165_130 Hb_000165_130 Hb_001268_210--Hb_000165_130 Hb_000197_210 Hb_000197_210 Hb_001268_210--Hb_000197_210 Hb_002475_050 Hb_002475_050 Hb_001268_210--Hb_002475_050 Hb_000230_370 Hb_000230_370 Hb_003216_110--Hb_000230_370 Hb_001408_090 Hb_001408_090 Hb_003216_110--Hb_001408_090 Hb_002025_140 Hb_002025_140 Hb_003216_110--Hb_002025_140 Hb_001969_040 Hb_001969_040 Hb_003216_110--Hb_001969_040 Hb_005028_010 Hb_005028_010 Hb_003216_110--Hb_005028_010 Hb_002986_050 Hb_002986_050 Hb_003216_110--Hb_002986_050 Hb_135810_010 Hb_135810_010 Hb_002027_220--Hb_135810_010 Hb_000120_240 Hb_000120_240 Hb_002027_220--Hb_000120_240 Hb_012977_010 Hb_012977_010 Hb_002027_220--Hb_012977_010 Hb_012390_010 Hb_012390_010 Hb_002027_220--Hb_012390_010 Hb_003654_010 Hb_003654_010 Hb_002027_220--Hb_003654_010 Hb_046615_020 Hb_046615_020 Hb_004143_070--Hb_046615_020 Hb_002493_090 Hb_002493_090 Hb_004143_070--Hb_002493_090 Hb_000181_310 Hb_000181_310 Hb_004143_070--Hb_000181_310 Hb_002159_040 Hb_002159_040 Hb_004143_070--Hb_002159_040 Hb_000244_240 Hb_000244_240 Hb_004143_070--Hb_000244_240 Hb_033594_020 Hb_033594_020 Hb_004143_070--Hb_033594_020 Hb_000165_130--Hb_002025_140 Hb_000849_100 Hb_000849_100 Hb_000165_130--Hb_000849_100 Hb_000134_360 Hb_000134_360 Hb_000165_130--Hb_000134_360 Hb_000165_130--Hb_001969_040 Hb_000165_130--Hb_002493_090 Hb_000732_020 Hb_000732_020 Hb_000165_130--Hb_000732_020 Hb_000042_270 Hb_000042_270 Hb_000197_210--Hb_000042_270 Hb_000236_380 Hb_000236_380 Hb_000197_210--Hb_000236_380 Hb_008406_140 Hb_008406_140 Hb_000197_210--Hb_008406_140 Hb_001863_110 Hb_001863_110 Hb_000197_210--Hb_001863_110 Hb_000497_230 Hb_000497_230 Hb_000197_210--Hb_000497_230 Hb_006816_390 Hb_006816_390 Hb_000197_210--Hb_006816_390 Hb_000372_040 Hb_000372_040 Hb_002475_050--Hb_000372_040 Hb_079326_010 Hb_079326_010 Hb_002475_050--Hb_079326_010 Hb_002475_050--Hb_002986_050 Hb_004881_050 Hb_004881_050 Hb_002475_050--Hb_004881_050 Hb_002739_080 Hb_002739_080 Hb_002475_050--Hb_002739_080 Hb_005000_270 Hb_005000_270 Hb_002475_050--Hb_005000_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
93.7908 19.0471 15.6636 26.807 59.6458 83.7713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.0537 11.9413 23.5683 8.72721 16.1612

CAGE analysis