Hb_001268_400

Information

Type -
Description -
Location Contig1268: 356303-356996
Sequence    

Annotation

kegg
ID bdi:104583970
description uncharacterized LOC104583970
nr
ID XP_010236322.1
description PREDICTED: uncharacterized protein LOC104583970 [Brachypodium distachyon]
swissprot
ID -
description -
trembl
ID A0A0E0LYL2
description Uncharacterized protein OS=Oryza punctata PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001268_400 0.0 - - PREDICTED: uncharacterized protein LOC104583970 [Brachypodium distachyon]
2 Hb_000193_240 0.1261446133 - - hypothetical protein CISIN_1g0449881mg, partial [Citrus sinensis]
3 Hb_000749_250 0.1356735572 - - PREDICTED: lanC-like protein GCR2 [Jatropha curcas]
4 Hb_004871_050 0.1551518813 - - hypothetical protein F383_22684 [Gossypium arboreum]
5 Hb_010417_020 0.1555414013 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
6 Hb_001232_130 0.1607749224 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1-like [Jatropha curcas]
7 Hb_152439_020 0.1608710513 - - PREDICTED: copper-transporting ATPase RAN1 isoform X1 [Jatropha curcas]
8 Hb_003943_030 0.1629394376 - - PREDICTED: pentatricopeptide repeat-containing protein At1g32415, mitochondrial [Jatropha curcas]
9 Hb_143629_090 0.1726133353 - - PREDICTED: uncharacterized protein LOC105647358 [Jatropha curcas]
10 Hb_000157_010 0.1733493665 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
11 Hb_001143_090 0.176233695 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Jatropha curcas]
12 Hb_001959_160 0.1789422773 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
13 Hb_002756_020 0.1801646126 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
14 Hb_004429_070 0.1808629404 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
15 Hb_001766_100 0.1812165362 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_013818_060 0.182205209 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
17 Hb_006594_020 0.18425323 - - PREDICTED: uncharacterized protein LOC105138974 isoform X1 [Populus euphratica]
18 Hb_000249_130 0.1852610092 - - hypothetical protein RCOM_0254640 [Ricinus communis]
19 Hb_002290_040 0.1860010539 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001153_220 0.1868508161 - - PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Jatropha curcas]

Gene co-expression network

sample Hb_001268_400 Hb_001268_400 Hb_000193_240 Hb_000193_240 Hb_001268_400--Hb_000193_240 Hb_000749_250 Hb_000749_250 Hb_001268_400--Hb_000749_250 Hb_004871_050 Hb_004871_050 Hb_001268_400--Hb_004871_050 Hb_010417_020 Hb_010417_020 Hb_001268_400--Hb_010417_020 Hb_001232_130 Hb_001232_130 Hb_001268_400--Hb_001232_130 Hb_152439_020 Hb_152439_020 Hb_001268_400--Hb_152439_020 Hb_002983_030 Hb_002983_030 Hb_000193_240--Hb_002983_030 Hb_004453_140 Hb_004453_140 Hb_000193_240--Hb_004453_140 Hb_000193_240--Hb_000749_250 Hb_001143_090 Hb_001143_090 Hb_000193_240--Hb_001143_090 Hb_003060_030 Hb_003060_030 Hb_000193_240--Hb_003060_030 Hb_000749_250--Hb_001232_130 Hb_003943_030 Hb_003943_030 Hb_000749_250--Hb_003943_030 Hb_000749_250--Hb_001143_090 Hb_163950_010 Hb_163950_010 Hb_000749_250--Hb_163950_010 Hb_001959_160 Hb_001959_160 Hb_000749_250--Hb_001959_160 Hb_001946_320 Hb_001946_320 Hb_000749_250--Hb_001946_320 Hb_000972_010 Hb_000972_010 Hb_004871_050--Hb_000972_010 Hb_000120_650 Hb_000120_650 Hb_004871_050--Hb_000120_650 Hb_000249_130 Hb_000249_130 Hb_004871_050--Hb_000249_130 Hb_017124_020 Hb_017124_020 Hb_004871_050--Hb_017124_020 Hb_000120_120 Hb_000120_120 Hb_004871_050--Hb_000120_120 Hb_011457_170 Hb_011457_170 Hb_010417_020--Hb_011457_170 Hb_000157_010 Hb_000157_010 Hb_010417_020--Hb_000157_010 Hb_094744_010 Hb_094744_010 Hb_010417_020--Hb_094744_010 Hb_006594_020 Hb_006594_020 Hb_010417_020--Hb_006594_020 Hb_010589_040 Hb_010589_040 Hb_010417_020--Hb_010589_040 Hb_010417_020--Hb_004453_140 Hb_002307_090 Hb_002307_090 Hb_001232_130--Hb_002307_090 Hb_001232_130--Hb_001946_320 Hb_001232_130--Hb_003943_030 Hb_001232_130--Hb_010589_040 Hb_002936_050 Hb_002936_050 Hb_001232_130--Hb_002936_050 Hb_000193_250 Hb_000193_250 Hb_152439_020--Hb_000193_250 Hb_152439_020--Hb_000157_010 Hb_183612_100 Hb_183612_100 Hb_152439_020--Hb_183612_100 Hb_004306_060 Hb_004306_060 Hb_152439_020--Hb_004306_060 Hb_143629_090 Hb_143629_090 Hb_152439_020--Hb_143629_090 Hb_002498_060 Hb_002498_060 Hb_152439_020--Hb_002498_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.97618 1.21236 0.0704344 0.531877 3.59109 3.55508
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.86509 10.1246 22.583 1.42224 0.324347

CAGE analysis