Hb_001269_290

Information

Type -
Description -
Location Contig1269: 299776-303046
Sequence    

Annotation

kegg
ID mdm:103438859
description uncharacterized LOC103438859
nr
ID XP_008375623.1
description PREDICTED: uncharacterized protein LOC103438859 [Malus domestica]
swissprot
ID -
description -
trembl
ID A0A022PT70
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011844mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001269_290 0.0 - - PREDICTED: uncharacterized protein LOC103438859 [Malus domestica]
2 Hb_006907_100 0.2168100335 - - PREDICTED: tropinone reductase-like 3 [Jatropha curcas]
3 Hb_164255_010 0.2175136093 - - PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]
4 Hb_005928_050 0.2376158903 - - glutathione reductase [Hevea brasiliensis]
5 Hb_155541_010 0.2459108247 - - -
6 Hb_012379_010 0.2585572566 - - -
7 Hb_074836_010 0.2593174807 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002631_300 0.2616023657 - - PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas]
9 Hb_000045_280 0.2622436868 - - hypothetical protein JCGZ_04076 [Jatropha curcas]
10 Hb_001771_080 0.2663640401 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Amborella trichopoda]
11 Hb_000926_230 0.2691855192 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009976_010 0.2784061209 - - PREDICTED: uncharacterized protein LOC105630216 [Jatropha curcas]
13 Hb_000099_230 0.2848323577 - - PREDICTED: F-box protein SKIP19-like [Gossypium raimondii]
14 Hb_000261_170 0.2849830787 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
15 Hb_010913_010 0.2878700557 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
16 Hb_000743_030 0.2889915237 - - NmrA-like negative transcriptional regulator family protein [Theobroma cacao]
17 Hb_178227_010 0.2891594158 - - Mitochondrial import inner membrane translocase subunit Tim13, putative [Ricinus communis]
18 Hb_004241_010 0.2910505453 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
19 Hb_118228_010 0.2950636249 - - PREDICTED: pirin-like protein [Jatropha curcas]
20 Hb_001269_250 0.2967370321 - - PREDICTED: factor of DNA methylation 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001269_290 Hb_001269_290 Hb_006907_100 Hb_006907_100 Hb_001269_290--Hb_006907_100 Hb_164255_010 Hb_164255_010 Hb_001269_290--Hb_164255_010 Hb_005928_050 Hb_005928_050 Hb_001269_290--Hb_005928_050 Hb_155541_010 Hb_155541_010 Hb_001269_290--Hb_155541_010 Hb_012379_010 Hb_012379_010 Hb_001269_290--Hb_012379_010 Hb_074836_010 Hb_074836_010 Hb_001269_290--Hb_074836_010 Hb_000302_130 Hb_000302_130 Hb_006907_100--Hb_000302_130 Hb_000743_030 Hb_000743_030 Hb_006907_100--Hb_000743_030 Hb_005000_250 Hb_005000_250 Hb_006907_100--Hb_005000_250 Hb_000122_050 Hb_000122_050 Hb_006907_100--Hb_000122_050 Hb_006907_100--Hb_155541_010 Hb_006907_100--Hb_005928_050 Hb_010068_100 Hb_010068_100 Hb_164255_010--Hb_010068_100 Hb_164255_010--Hb_074836_010 Hb_001545_050 Hb_001545_050 Hb_164255_010--Hb_001545_050 Hb_082407_010 Hb_082407_010 Hb_164255_010--Hb_082407_010 Hb_000926_230 Hb_000926_230 Hb_164255_010--Hb_000926_230 Hb_005928_050--Hb_155541_010 Hb_005928_050--Hb_000122_050 Hb_005928_050--Hb_000302_130 Hb_011485_090 Hb_011485_090 Hb_005928_050--Hb_011485_090 Hb_155541_010--Hb_011485_090 Hb_118228_010 Hb_118228_010 Hb_155541_010--Hb_118228_010 Hb_155541_010--Hb_000302_130 Hb_010913_010 Hb_010913_010 Hb_155541_010--Hb_010913_010 Hb_004241_010 Hb_004241_010 Hb_012379_010--Hb_004241_010 Hb_090065_010 Hb_090065_010 Hb_012379_010--Hb_090065_010 Hb_002157_090 Hb_002157_090 Hb_012379_010--Hb_002157_090 Hb_015586_010 Hb_015586_010 Hb_012379_010--Hb_015586_010 Hb_000111_230 Hb_000111_230 Hb_012379_010--Hb_000111_230 Hb_074836_010--Hb_000926_230 Hb_009620_090 Hb_009620_090 Hb_074836_010--Hb_009620_090 Hb_074836_010--Hb_155541_010 Hb_074836_010--Hb_001545_050 Hb_074836_010--Hb_118228_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.04822 0.10474 0.182936 0.239762 0.0226032 0.0272977
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.11058 0.347858 0 0 0

CAGE analysis