Hb_001269_660

Information

Type -
Description -
Location Contig1269: 674788-677254
Sequence    

Annotation

kegg
ID pop:POPTR_0001s03320g
description POPTRDRAFT_547702; aspartyl protease family protein
nr
ID XP_012067462.1
description PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
swissprot
ID Q9LHE3
description Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1
trembl
ID A0A067L0I3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26960 PE=3 SV=1
Gene Ontology
ID GO:0048046
description protein aspartic protease in guard cell 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08257: 674796-677168
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001269_660 0.0 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
2 Hb_149507_010 0.0766324784 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
3 Hb_012395_060 0.0834088906 - - PREDICTED: actin-related protein 2/3 complex subunit 2B [Jatropha curcas]
4 Hb_010264_010 0.0939158165 - - PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Jatropha curcas]
5 Hb_121624_010 0.1009693595 - - PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
6 Hb_001277_010 0.1043876498 - - unknown [Populus trichocarpa]
7 Hb_002518_230 0.1062428803 - - -
8 Hb_000910_060 0.1065500637 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
9 Hb_025623_010 0.1066815995 - - -
10 Hb_002370_020 0.1089255196 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
11 Hb_000017_140 0.1109524002 - - polygalacturonase, putative [Ricinus communis]
12 Hb_002374_510 0.1130012157 - - Esterase precursor, putative [Ricinus communis]
13 Hb_002245_060 0.1138713622 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
14 Hb_004466_090 0.1163577282 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004804_010 0.1176416252 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
16 Hb_000866_400 0.1209927727 - - -
17 Hb_032143_010 0.1242485602 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
18 Hb_000933_170 0.1258843216 - - PREDICTED: uncharacterized protein At5g01610 [Jatropha curcas]
19 Hb_001143_210 0.1260679725 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
20 Hb_007163_110 0.1272466673 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]

Gene co-expression network

sample Hb_001269_660 Hb_001269_660 Hb_149507_010 Hb_149507_010 Hb_001269_660--Hb_149507_010 Hb_012395_060 Hb_012395_060 Hb_001269_660--Hb_012395_060 Hb_010264_010 Hb_010264_010 Hb_001269_660--Hb_010264_010 Hb_121624_010 Hb_121624_010 Hb_001269_660--Hb_121624_010 Hb_001277_010 Hb_001277_010 Hb_001269_660--Hb_001277_010 Hb_002518_230 Hb_002518_230 Hb_001269_660--Hb_002518_230 Hb_002370_020 Hb_002370_020 Hb_149507_010--Hb_002370_020 Hb_149507_010--Hb_012395_060 Hb_149507_010--Hb_001277_010 Hb_025623_010 Hb_025623_010 Hb_149507_010--Hb_025623_010 Hb_000866_400 Hb_000866_400 Hb_149507_010--Hb_000866_400 Hb_169077_030 Hb_169077_030 Hb_012395_060--Hb_169077_030 Hb_004804_010 Hb_004804_010 Hb_012395_060--Hb_004804_010 Hb_001534_140 Hb_001534_140 Hb_012395_060--Hb_001534_140 Hb_138585_010 Hb_138585_010 Hb_012395_060--Hb_138585_010 Hb_000152_570 Hb_000152_570 Hb_012395_060--Hb_000152_570 Hb_032143_010 Hb_032143_010 Hb_010264_010--Hb_032143_010 Hb_000017_140 Hb_000017_140 Hb_010264_010--Hb_000017_140 Hb_000265_030 Hb_000265_030 Hb_010264_010--Hb_000265_030 Hb_000665_210 Hb_000665_210 Hb_010264_010--Hb_000665_210 Hb_007101_140 Hb_007101_140 Hb_010264_010--Hb_007101_140 Hb_002245_060 Hb_002245_060 Hb_121624_010--Hb_002245_060 Hb_121624_010--Hb_025623_010 Hb_011501_020 Hb_011501_020 Hb_121624_010--Hb_011501_020 Hb_001408_200 Hb_001408_200 Hb_121624_010--Hb_001408_200 Hb_000402_060 Hb_000402_060 Hb_121624_010--Hb_000402_060 Hb_001104_220 Hb_001104_220 Hb_001277_010--Hb_001104_220 Hb_000635_100 Hb_000635_100 Hb_001277_010--Hb_000635_100 Hb_000941_110 Hb_000941_110 Hb_001277_010--Hb_000941_110 Hb_008441_010 Hb_008441_010 Hb_001277_010--Hb_008441_010 Hb_004466_090 Hb_004466_090 Hb_002518_230--Hb_004466_090 Hb_002518_230--Hb_012395_060 Hb_000193_070 Hb_000193_070 Hb_002518_230--Hb_000193_070 Hb_002518_230--Hb_000152_570 Hb_004374_030 Hb_004374_030 Hb_002518_230--Hb_004374_030 Hb_002518_230--Hb_000017_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0521824 1.047 11.0189 37.0572 0.0886178 0.00913583
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0474529 0.0186683 0.0353569 7.69042 33.3712

CAGE analysis