Hb_001277_090

Information

Type -
Description -
Location Contig1277: 112036-115962
Sequence    

Annotation

kegg
ID rcu:RCOM_0910730
description hypothetical protein
nr
ID XP_012069729.1
description PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVP6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02249 PE=4 SV=1
Gene Ontology
ID GO:0009507
description PREDICTED: uncharacterized protein LOC105632061

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001277_090 0.0 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
2 Hb_000094_130 0.1442690766 - - PREDICTED: random slug protein 5 [Jatropha curcas]
3 Hb_000327_220 0.1571242665 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
4 Hb_000141_030 0.1613341042 - - PREDICTED: scarecrow-like protein 22 [Jatropha curcas]
5 Hb_006153_080 0.169130835 - - flavin-containing monooxygenase-related family protein [Populus trichocarpa]
6 Hb_011360_080 0.1695087996 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
7 Hb_004785_140 0.1703637048 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X2 [Jatropha curcas]
8 Hb_001035_070 0.1730392923 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
9 Hb_004429_070 0.1731145652 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
10 Hb_005542_060 0.1765097331 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_056753_010 0.1865297886 - - PREDICTED: L-galactono-1,4-lactone dehydrogenase, mitochondrial isoform X2 [Jatropha curcas]
12 Hb_001159_080 0.1879227191 - - hypothetical protein JCGZ_20745 [Jatropha curcas]
13 Hb_003333_050 0.1912762442 - - hypothetical protein JCGZ_20906 [Jatropha curcas]
14 Hb_000477_080 0.1929346529 - - PREDICTED: 3-ketoacyl-CoA synthase 11 [Jatropha curcas]
15 Hb_002756_020 0.1954043655 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
16 Hb_000172_560 0.1978522557 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Jatropha curcas]
17 Hb_004679_050 0.1980529955 - - galactono-1,4-lactone dehydrogenase, putative [Ricinus communis]
18 Hb_005188_090 0.1986351575 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
19 Hb_005224_010 0.2014697067 - - glycine-rich protein [Bruguiera gymnorhiza]
20 Hb_001096_110 0.2032281029 - - PREDICTED: probable VAMP-like protein At1g33475 [Jatropha curcas]

Gene co-expression network

sample Hb_001277_090 Hb_001277_090 Hb_000094_130 Hb_000094_130 Hb_001277_090--Hb_000094_130 Hb_000327_220 Hb_000327_220 Hb_001277_090--Hb_000327_220 Hb_000141_030 Hb_000141_030 Hb_001277_090--Hb_000141_030 Hb_006153_080 Hb_006153_080 Hb_001277_090--Hb_006153_080 Hb_011360_080 Hb_011360_080 Hb_001277_090--Hb_011360_080 Hb_004785_140 Hb_004785_140 Hb_001277_090--Hb_004785_140 Hb_005188_090 Hb_005188_090 Hb_000094_130--Hb_005188_090 Hb_000094_130--Hb_000327_220 Hb_004410_100 Hb_004410_100 Hb_000094_130--Hb_004410_100 Hb_000236_140 Hb_000236_140 Hb_000094_130--Hb_000236_140 Hb_005043_010 Hb_005043_010 Hb_000094_130--Hb_005043_010 Hb_002756_020 Hb_002756_020 Hb_000327_220--Hb_002756_020 Hb_011030_020 Hb_011030_020 Hb_000327_220--Hb_011030_020 Hb_001159_080 Hb_001159_080 Hb_000327_220--Hb_001159_080 Hb_005224_010 Hb_005224_010 Hb_000327_220--Hb_005224_010 Hb_003551_050 Hb_003551_050 Hb_000327_220--Hb_003551_050 Hb_000789_220 Hb_000789_220 Hb_000327_220--Hb_000789_220 Hb_000963_140 Hb_000963_140 Hb_000141_030--Hb_000963_140 Hb_010931_050 Hb_010931_050 Hb_000141_030--Hb_010931_050 Hb_000141_030--Hb_011360_080 Hb_004429_070 Hb_004429_070 Hb_000141_030--Hb_004429_070 Hb_004324_050 Hb_004324_050 Hb_000141_030--Hb_004324_050 Hb_000368_060 Hb_000368_060 Hb_000141_030--Hb_000368_060 Hb_004679_050 Hb_004679_050 Hb_006153_080--Hb_004679_050 Hb_005542_060 Hb_005542_060 Hb_006153_080--Hb_005542_060 Hb_000340_310 Hb_000340_310 Hb_006153_080--Hb_000340_310 Hb_001096_110 Hb_001096_110 Hb_006153_080--Hb_001096_110 Hb_000130_110 Hb_000130_110 Hb_006153_080--Hb_000130_110 Hb_000477_080 Hb_000477_080 Hb_011360_080--Hb_000477_080 Hb_011360_080--Hb_004429_070 Hb_002290_040 Hb_002290_040 Hb_011360_080--Hb_002290_040 Hb_011360_080--Hb_000368_060 Hb_011360_080--Hb_002756_020 Hb_002205_190 Hb_002205_190 Hb_004785_140--Hb_002205_190 Hb_004785_140--Hb_005542_060 Hb_004785_140--Hb_011030_020 Hb_001493_180 Hb_001493_180 Hb_004785_140--Hb_001493_180 Hb_004785_140--Hb_000236_140 Hb_000445_040 Hb_000445_040 Hb_004785_140--Hb_000445_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.55643 1.05274 1.00739 1.34633 1.1322 1.16117
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.90218 1.7571 14.7512 2.1568 1.60086

CAGE analysis