Hb_001279_040

Information

Type -
Description -
Location Contig1279: 42678-47098
Sequence    

Annotation

kegg
ID rcu:RCOM_0530660
description hypothetical protein
nr
ID XP_012071244.1
description PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
swissprot
ID Q9LK21
description Probable carboxylesterase 11 OS=Arabidopsis thaliana GN=CXE11 PE=2 SV=1
trembl
ID A0A067LNC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10185 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08574: 42736-47110
cDNA
(Sanger)
(ID:Location)		 015_B06.ab1: 42736-43337

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001279_040 0.0 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
2 Hb_000806_030 0.0747504686 transcription factor TF Family: C2H2 PREDICTED: probable lysine-specific demethylase ELF6 [Jatropha curcas]
3 Hb_000181_340 0.0777902244 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
4 Hb_000193_330 0.0792452348 - - PREDICTED: formin-like protein 20 [Jatropha curcas]
5 Hb_003918_030 0.082080926 - - PREDICTED: oxysterol-binding protein-related protein 1C-like isoform X1 [Jatropha curcas]
6 Hb_005214_140 0.0872911522 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
7 Hb_001563_010 0.0890921143 transcription factor TF Family: SET PREDICTED: probable histone-lysine N-methyltransferase ATXR3 [Jatropha curcas]
8 Hb_006275_020 0.0896798212 - - PREDICTED: VIN3-like protein 2 [Jatropha curcas]
9 Hb_000479_070 0.0907401045 - - PREDICTED: uncharacterized protein LOC105644141 [Jatropha curcas]
10 Hb_000103_340 0.0926816308 - - PREDICTED: uncharacterized protein LOC105632051 isoform X4 [Jatropha curcas]
11 Hb_004044_050 0.0932473222 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Jatropha curcas]
12 Hb_001005_130 0.0934535134 - - PREDICTED: uncharacterized protein LOC105630220 isoform X4 [Jatropha curcas]
13 Hb_000538_280 0.093547163 - - PREDICTED: uncharacterized protein LOC105642112 [Jatropha curcas]
14 Hb_001329_250 0.0937974271 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105642692 isoform X1 [Jatropha curcas]
15 Hb_002329_020 0.0948141085 - - PREDICTED: uncharacterized protein LOC105648015 [Jatropha curcas]
16 Hb_017214_040 0.0953412417 - - PREDICTED: E3 ubiquitin-protein ligase COP1 isoform X1 [Jatropha curcas]
17 Hb_006816_370 0.0953660102 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105647456 [Jatropha curcas]
18 Hb_001279_120 0.0956275049 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Jatropha curcas]
19 Hb_000120_130 0.0957749482 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 66 [Jatropha curcas]
20 Hb_000059_230 0.098674712 - - PREDICTED: uncharacterized protein LOC105648049 [Jatropha curcas]

Gene co-expression network

sample Hb_001279_040 Hb_001279_040 Hb_000806_030 Hb_000806_030 Hb_001279_040--Hb_000806_030 Hb_000181_340 Hb_000181_340 Hb_001279_040--Hb_000181_340 Hb_000193_330 Hb_000193_330 Hb_001279_040--Hb_000193_330 Hb_003918_030 Hb_003918_030 Hb_001279_040--Hb_003918_030 Hb_005214_140 Hb_005214_140 Hb_001279_040--Hb_005214_140 Hb_001563_010 Hb_001563_010 Hb_001279_040--Hb_001563_010 Hb_004659_090 Hb_004659_090 Hb_000806_030--Hb_004659_090 Hb_002056_100 Hb_002056_100 Hb_000806_030--Hb_002056_100 Hb_000645_130 Hb_000645_130 Hb_000806_030--Hb_000645_130 Hb_000179_190 Hb_000179_190 Hb_000806_030--Hb_000179_190 Hb_003929_210 Hb_003929_210 Hb_000806_030--Hb_003929_210 Hb_000181_340--Hb_000193_330 Hb_012632_010 Hb_012632_010 Hb_000181_340--Hb_012632_010 Hb_062226_070 Hb_062226_070 Hb_000181_340--Hb_062226_070 Hb_004374_110 Hb_004374_110 Hb_000181_340--Hb_004374_110 Hb_000103_340 Hb_000103_340 Hb_000181_340--Hb_000103_340 Hb_001999_290 Hb_001999_290 Hb_000181_340--Hb_001999_290 Hb_000538_280 Hb_000538_280 Hb_000193_330--Hb_000538_280 Hb_003040_050 Hb_003040_050 Hb_000193_330--Hb_003040_050 Hb_001163_060 Hb_001163_060 Hb_000193_330--Hb_001163_060 Hb_004003_040 Hb_004003_040 Hb_000193_330--Hb_004003_040 Hb_007763_070 Hb_007763_070 Hb_000193_330--Hb_007763_070 Hb_000479_070 Hb_000479_070 Hb_003918_030--Hb_000479_070 Hb_001545_150 Hb_001545_150 Hb_003918_030--Hb_001545_150 Hb_001473_110 Hb_001473_110 Hb_003918_030--Hb_001473_110 Hb_003918_030--Hb_003929_210 Hb_003939_060 Hb_003939_060 Hb_003918_030--Hb_003939_060 Hb_000110_350 Hb_000110_350 Hb_003918_030--Hb_000110_350 Hb_000270_190 Hb_000270_190 Hb_005214_140--Hb_000270_190 Hb_001257_030 Hb_001257_030 Hb_005214_140--Hb_001257_030 Hb_004044_050 Hb_004044_050 Hb_005214_140--Hb_004044_050 Hb_001817_170 Hb_001817_170 Hb_005214_140--Hb_001817_170 Hb_001329_250 Hb_001329_250 Hb_005214_140--Hb_001329_250 Hb_005214_140--Hb_000103_340 Hb_006816_370 Hb_006816_370 Hb_001563_010--Hb_006816_370 Hb_001648_020 Hb_001648_020 Hb_001563_010--Hb_001648_020 Hb_009150_020 Hb_009150_020 Hb_001563_010--Hb_009150_020 Hb_000579_010 Hb_000579_010 Hb_001563_010--Hb_000579_010 Hb_001563_010--Hb_000181_340 Hb_001488_180 Hb_001488_180 Hb_001563_010--Hb_001488_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.7898 21.4738 14.5145 15.0103 10.2173 10.3651
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.65489 6.64571 12.874 7.15887 23.0372

CAGE analysis