Hb_001279_130

Information

Type -
Description -
Location Contig1279: 146022-146642
Sequence    

Annotation

kegg
ID rcu:RCOM_0530890
description hypothetical protein
nr
ID XP_010111649.1
description hypothetical protein L484_017676 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9S8I3
description Uncharacterized protein OS=Morus notabilis GN=L484_017676 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001279_130 0.0 - - hypothetical protein L484_017676 [Morus notabilis]
2 Hb_002182_090 0.120599307 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF4.6-like isoform X1 [Gossypium raimondii]
3 Hb_000380_020 0.1361038385 transcription factor TF Family: C3H PREDICTED: zinc finger protein 36, C3H1 type-like 3 [Jatropha curcas]
4 Hb_029243_040 0.1369191444 - - PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial-like [Populus euphratica]
5 Hb_010594_030 0.1387262686 - - -
6 Hb_001102_250 0.1391775167 - - PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Jatropha curcas]
7 Hb_006594_020 0.1403648291 - - PREDICTED: uncharacterized protein LOC105138974 isoform X1 [Populus euphratica]
8 Hb_072912_020 0.1421803382 - - abhydrolase domain containing, putative [Ricinus communis]
9 Hb_001213_120 0.1456472976 - - PREDICTED: immediate early response 3-interacting protein 1-like [Brassica rapa]
10 Hb_000544_110 0.1490722697 - - PREDICTED: probable calcium-binding protein CML27 [Jatropha curcas]
11 Hb_005841_040 0.1508113474 - - stress-induced hydrophobic peptide 1 [Hevea brasiliensis]
12 Hb_008066_040 0.1530278831 transcription factor TF Family: M-type PREDICTED: agamous-like MADS-box protein AGL62 [Jatropha curcas]
13 Hb_078633_010 0.1568122323 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
14 Hb_014497_110 0.1582281999 - - PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas]
15 Hb_001268_080 0.1582812184 - - catalytic, putative [Ricinus communis]
16 Hb_002260_090 0.1588751528 - - PREDICTED: uncharacterized protein LOC105636025 isoform X1 [Jatropha curcas]
17 Hb_000196_090 0.1645003329 - - axonemal dynein light chain, putative [Ricinus communis]
18 Hb_001545_060 0.1653072106 - - PREDICTED: uncharacterized protein LOC105643880 [Jatropha curcas]
19 Hb_003043_120 0.1665496886 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001935_030 0.169398727 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001279_130 Hb_001279_130 Hb_002182_090 Hb_002182_090 Hb_001279_130--Hb_002182_090 Hb_000380_020 Hb_000380_020 Hb_001279_130--Hb_000380_020 Hb_029243_040 Hb_029243_040 Hb_001279_130--Hb_029243_040 Hb_010594_030 Hb_010594_030 Hb_001279_130--Hb_010594_030 Hb_001102_250 Hb_001102_250 Hb_001279_130--Hb_001102_250 Hb_006594_020 Hb_006594_020 Hb_001279_130--Hb_006594_020 Hb_001268_080 Hb_001268_080 Hb_002182_090--Hb_001268_080 Hb_072912_020 Hb_072912_020 Hb_002182_090--Hb_072912_020 Hb_000723_190 Hb_000723_190 Hb_002182_090--Hb_000723_190 Hb_002603_150 Hb_002603_150 Hb_002182_090--Hb_002603_150 Hb_000215_180 Hb_000215_180 Hb_002182_090--Hb_000215_180 Hb_000380_020--Hb_006594_020 Hb_000749_250 Hb_000749_250 Hb_000380_020--Hb_000749_250 Hb_005614_050 Hb_005614_050 Hb_000380_020--Hb_005614_050 Hb_001143_090 Hb_001143_090 Hb_000380_020--Hb_001143_090 Hb_000638_020 Hb_000638_020 Hb_000380_020--Hb_000638_020 Hb_000260_580 Hb_000260_580 Hb_029243_040--Hb_000260_580 Hb_000896_120 Hb_000896_120 Hb_029243_040--Hb_000896_120 Hb_001832_120 Hb_001832_120 Hb_029243_040--Hb_001832_120 Hb_029243_040--Hb_000215_180 Hb_029243_040--Hb_002182_090 Hb_034585_050 Hb_034585_050 Hb_010594_030--Hb_034585_050 Hb_010594_030--Hb_001102_250 Hb_002492_020 Hb_002492_020 Hb_010594_030--Hb_002492_020 Hb_005211_070 Hb_005211_070 Hb_010594_030--Hb_005211_070 Hb_012395_210 Hb_012395_210 Hb_010594_030--Hb_012395_210 Hb_006351_110 Hb_006351_110 Hb_010594_030--Hb_006351_110 Hb_001102_250--Hb_072912_020 Hb_003095_070 Hb_003095_070 Hb_001102_250--Hb_003095_070 Hb_000544_110 Hb_000544_110 Hb_001102_250--Hb_000544_110 Hb_005841_040 Hb_005841_040 Hb_001102_250--Hb_005841_040 Hb_005137_020 Hb_005137_020 Hb_001102_250--Hb_005137_020 Hb_004297_040 Hb_004297_040 Hb_001102_250--Hb_004297_040 Hb_006594_020--Hb_005614_050 Hb_007161_010 Hb_007161_010 Hb_006594_020--Hb_007161_010 Hb_001232_130 Hb_001232_130 Hb_006594_020--Hb_001232_130 Hb_017434_050 Hb_017434_050 Hb_006594_020--Hb_017434_050 Hb_019654_090 Hb_019654_090 Hb_006594_020--Hb_019654_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
151.534 16.9418 7.52917 14.0905 48.0686 32.4337
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
217.58 355.525 243.429 85.7072 3.66922

CAGE analysis