Hb_001288_010

Information

Type -
Description -
Location Contig1288: 24433-24906
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001288_010 0.0 - - -
2 Hb_000281_200 0.0693193074 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
3 Hb_012660_010 0.0695128574 - - hypothetical protein JCGZ_25971 [Jatropha curcas]
4 Hb_004564_010 0.0725543856 - - receptor-kinase, putative [Ricinus communis]
5 Hb_178389_020 0.073613484 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
6 Hb_001442_080 0.0817082206 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
7 Hb_003968_020 0.083483991 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
8 Hb_005356_010 0.0848099579 - - hypothetical protein POPTR_0003s16550g [Populus trichocarpa]
9 Hb_107258_010 0.0853031804 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
10 Hb_001863_290 0.091510298 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
11 Hb_000483_020 0.0934472518 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
12 Hb_020332_040 0.0971372162 - - PREDICTED: alcohol dehydrogenase 1-like [Jatropha curcas]
13 Hb_001134_040 0.097169284 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
14 Hb_002900_020 0.0994368223 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
15 Hb_011486_030 0.1012542689 - - branched-chain amino acid aminotransferase, putative [Ricinus communis]
16 Hb_058620_010 0.1037613888 - - cytochrome P450, putative [Ricinus communis]
17 Hb_039655_010 0.1053262239 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
18 Hb_002917_010 0.1068495835 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
19 Hb_000301_030 0.1078490927 - - PREDICTED: pectate lyase-like [Jatropha curcas]
20 Hb_000189_260 0.1083425308 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001288_010 Hb_001288_010 Hb_000281_200 Hb_000281_200 Hb_001288_010--Hb_000281_200 Hb_012660_010 Hb_012660_010 Hb_001288_010--Hb_012660_010 Hb_004564_010 Hb_004564_010 Hb_001288_010--Hb_004564_010 Hb_178389_020 Hb_178389_020 Hb_001288_010--Hb_178389_020 Hb_001442_080 Hb_001442_080 Hb_001288_010--Hb_001442_080 Hb_003968_020 Hb_003968_020 Hb_001288_010--Hb_003968_020 Hb_005356_010 Hb_005356_010 Hb_000281_200--Hb_005356_010 Hb_007527_020 Hb_007527_020 Hb_000281_200--Hb_007527_020 Hb_000281_200--Hb_003968_020 Hb_000281_200--Hb_178389_020 Hb_039655_010 Hb_039655_010 Hb_000281_200--Hb_039655_010 Hb_020332_040 Hb_020332_040 Hb_012660_010--Hb_020332_040 Hb_107258_010 Hb_107258_010 Hb_012660_010--Hb_107258_010 Hb_011486_030 Hb_011486_030 Hb_012660_010--Hb_011486_030 Hb_001863_290 Hb_001863_290 Hb_012660_010--Hb_001863_290 Hb_000301_030 Hb_000301_030 Hb_012660_010--Hb_000301_030 Hb_004564_010--Hb_178389_020 Hb_004564_010--Hb_107258_010 Hb_004564_010--Hb_001442_080 Hb_004564_010--Hb_001863_290 Hb_002615_050 Hb_002615_050 Hb_004564_010--Hb_002615_050 Hb_178389_020--Hb_001442_080 Hb_178389_020--Hb_005356_010 Hb_178389_020--Hb_107258_010 Hb_002900_020 Hb_002900_020 Hb_178389_020--Hb_002900_020 Hb_001442_080--Hb_107258_010 Hb_001442_080--Hb_001863_290 Hb_064398_010 Hb_064398_010 Hb_001442_080--Hb_064398_010 Hb_000483_020 Hb_000483_020 Hb_001442_080--Hb_000483_020 Hb_000076_200 Hb_000076_200 Hb_003968_020--Hb_000076_200 Hb_023080_010 Hb_023080_010 Hb_003968_020--Hb_023080_010 Hb_006620_040 Hb_006620_040 Hb_003968_020--Hb_006620_040 Hb_039562_010 Hb_039562_010 Hb_003968_020--Hb_039562_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.81216 1.06389 3.15008 0 0.157816
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.205182 0 0 88.4544 1.97259

CAGE analysis