Hb_001310_070

Information

Type -
Description -
Location Contig1310: 99136-106572
Sequence    

Annotation

kegg
ID rcu:RCOM_0579590
description hypothetical protein
nr
ID XP_012079394.1
description PREDICTED: uncharacterized protein LOC105639838 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KIG8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12526 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001310_070 0.0 - - PREDICTED: uncharacterized protein LOC105639838 [Jatropha curcas]
2 Hb_000122_030 0.1461026176 - - PREDICTED: uncharacterized protein LOC104606081, partial [Nelumbo nucifera]
3 Hb_008221_110 0.1470341093 - - PREDICTED: diphthamide biosynthesis protein 4 [Jatropha curcas]
4 Hb_001057_050 0.1539547377 - - hypothetical protein POPTR_0003s15960g, partial [Populus trichocarpa]
5 Hb_008725_200 0.159995263 - - PREDICTED: uncharacterized protein LOC105642590 [Jatropha curcas]
6 Hb_000127_090 0.1621019053 - - conserved hypothetical protein [Ricinus communis]
7 Hb_102156_010 0.1695671759 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003023_040 0.1769943031 - - -
9 Hb_002671_080 0.1837348076 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10-like isoform X1 [Jatropha curcas]
10 Hb_004117_180 0.1839942597 - - -
11 Hb_115919_010 0.1853678185 - - unknown [Lotus japonicus]
12 Hb_002027_330 0.1877997272 - - -
13 Hb_000193_350 0.1925166131 - - eukaryotic translation initiation factor 5A isoform VI [Hevea brasiliensis]
14 Hb_000175_400 0.194583004 - - conserved hypothetical protein [Ricinus communis]
15 Hb_116264_010 0.1974490037 - - hypothetical protein JCGZ_05585 [Jatropha curcas]
16 Hb_002259_150 0.1982914519 - - BnaC04g40780D [Brassica napus]
17 Hb_007317_060 0.1996677134 - - 60S ribosomal protein L10aB [Hevea brasiliensis]
18 Hb_000258_030 0.200257993 - - -
19 Hb_175976_010 0.2005544665 - - -
20 Hb_020035_020 0.2012762034 - - PREDICTED: uncharacterized protein LOC105631020 [Jatropha curcas]

Gene co-expression network

sample Hb_001310_070 Hb_001310_070 Hb_000122_030 Hb_000122_030 Hb_001310_070--Hb_000122_030 Hb_008221_110 Hb_008221_110 Hb_001310_070--Hb_008221_110 Hb_001057_050 Hb_001057_050 Hb_001310_070--Hb_001057_050 Hb_008725_200 Hb_008725_200 Hb_001310_070--Hb_008725_200 Hb_000127_090 Hb_000127_090 Hb_001310_070--Hb_000127_090 Hb_102156_010 Hb_102156_010 Hb_001310_070--Hb_102156_010 Hb_000122_030--Hb_001057_050 Hb_115919_010 Hb_115919_010 Hb_000122_030--Hb_115919_010 Hb_000003_350 Hb_000003_350 Hb_000122_030--Hb_000003_350 Hb_004117_180 Hb_004117_180 Hb_000122_030--Hb_004117_180 Hb_005305_060 Hb_005305_060 Hb_000122_030--Hb_005305_060 Hb_175976_010 Hb_175976_010 Hb_008221_110--Hb_175976_010 Hb_008221_110--Hb_000127_090 Hb_001017_060 Hb_001017_060 Hb_008221_110--Hb_001017_060 Hb_010368_030 Hb_010368_030 Hb_008221_110--Hb_010368_030 Hb_007534_020 Hb_007534_020 Hb_008221_110--Hb_007534_020 Hb_004807_060 Hb_004807_060 Hb_001057_050--Hb_004807_060 Hb_000193_350 Hb_000193_350 Hb_001057_050--Hb_000193_350 Hb_001057_050--Hb_102156_010 Hb_000175_400 Hb_000175_400 Hb_001057_050--Hb_000175_400 Hb_017711_010 Hb_017711_010 Hb_001057_050--Hb_017711_010 Hb_002259_150 Hb_002259_150 Hb_001057_050--Hb_002259_150 Hb_002687_050 Hb_002687_050 Hb_008725_200--Hb_002687_050 Hb_134789_010 Hb_134789_010 Hb_008725_200--Hb_134789_010 Hb_033448_010 Hb_033448_010 Hb_008725_200--Hb_033448_010 Hb_000032_540 Hb_000032_540 Hb_008725_200--Hb_000032_540 Hb_049415_020 Hb_049415_020 Hb_008725_200--Hb_049415_020 Hb_000144_090 Hb_000144_090 Hb_008725_200--Hb_000144_090 Hb_000127_090--Hb_175976_010 Hb_166480_010 Hb_166480_010 Hb_000127_090--Hb_166480_010 Hb_000258_030 Hb_000258_030 Hb_000127_090--Hb_000258_030 Hb_106005_010 Hb_106005_010 Hb_000127_090--Hb_106005_010 Hb_000120_190 Hb_000120_190 Hb_000127_090--Hb_000120_190 Hb_102156_010--Hb_002259_150 Hb_102156_010--Hb_000175_400 Hb_102156_010--Hb_000193_350 Hb_102156_010--Hb_000032_540 Hb_002272_260 Hb_002272_260 Hb_102156_010--Hb_002272_260 Hb_004453_150 Hb_004453_150 Hb_102156_010--Hb_004453_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.541555 0.0364448 0 0.647959 0.307804 3.28427
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.98918 2.01981 0.928221 0.185713 0

CAGE analysis