Hb_001322_130

Information

Type -
Description -
Location Contig1322: 114535-119476
Sequence    

Annotation

kegg
ID rcu:RCOM_0192740
description Glycerol-3-phosphate transporter, putative
nr
ID XP_012070079.1
description PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
swissprot
ID O23596
description Putative glycerol-3-phosphate transporter 4 OS=Arabidopsis thaliana GN=At4g17550 PE=3 SV=2
trembl
ID A0A067KY74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03469 PE=4 SV=1
Gene Ontology
ID GO:0005774
description glycerol-3-phosphate transporter 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09268: 114539-119221
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001322_130 0.0 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
2 Hb_002253_080 0.0455887878 - - PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Jatropha curcas]
3 Hb_031042_050 0.0472816389 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
4 Hb_000866_460 0.0533215794 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Jatropha curcas]
5 Hb_002267_140 0.0630998465 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
6 Hb_000243_210 0.065362512 - - protein with unknown function [Ricinus communis]
7 Hb_019430_020 0.0657180697 - - PREDICTED: uncharacterized protein LOC105641844 isoform X1 [Jatropha curcas]
8 Hb_001318_070 0.06583177 transcription factor TF Family: SBP conserved hypothetical protein [Ricinus communis]
9 Hb_003729_030 0.0680944531 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
10 Hb_002783_040 0.0691832067 transcription factor TF Family: IWS1 -
11 Hb_002205_250 0.0696663547 - - PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Jatropha curcas]
12 Hb_008253_030 0.0704421472 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
13 Hb_000684_250 0.0713511845 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
14 Hb_143766_060 0.0715663075 - - PREDICTED: F-box/LRR-repeat protein At4g29420 [Jatropha curcas]
15 Hb_004410_120 0.0729367819 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
16 Hb_002235_300 0.0741238479 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280 isoform X1 [Jatropha curcas]
17 Hb_001279_120 0.0760480271 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Jatropha curcas]
18 Hb_000025_320 0.0760982502 - - PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Jatropha curcas]
19 Hb_000028_130 0.0770803463 - - PREDICTED: uncharacterized protein LOC105645303 isoform X1 [Jatropha curcas]
20 Hb_000069_470 0.0773952862 - - PREDICTED: uncharacterized protein LOC105642863 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001322_130 Hb_001322_130 Hb_002253_080 Hb_002253_080 Hb_001322_130--Hb_002253_080 Hb_031042_050 Hb_031042_050 Hb_001322_130--Hb_031042_050 Hb_000866_460 Hb_000866_460 Hb_001322_130--Hb_000866_460 Hb_002267_140 Hb_002267_140 Hb_001322_130--Hb_002267_140 Hb_000243_210 Hb_000243_210 Hb_001322_130--Hb_000243_210 Hb_019430_020 Hb_019430_020 Hb_001322_130--Hb_019430_020 Hb_008253_030 Hb_008253_030 Hb_002253_080--Hb_008253_030 Hb_001767_140 Hb_001767_140 Hb_002253_080--Hb_001767_140 Hb_002253_080--Hb_031042_050 Hb_002253_080--Hb_002267_140 Hb_002615_090 Hb_002615_090 Hb_002253_080--Hb_002615_090 Hb_000028_130 Hb_000028_130 Hb_031042_050--Hb_000028_130 Hb_000069_470 Hb_000069_470 Hb_031042_050--Hb_000069_470 Hb_001545_150 Hb_001545_150 Hb_031042_050--Hb_001545_150 Hb_004410_120 Hb_004410_120 Hb_031042_050--Hb_004410_120 Hb_002205_250 Hb_002205_250 Hb_000866_460--Hb_002205_250 Hb_002732_040 Hb_002732_040 Hb_000866_460--Hb_002732_040 Hb_000866_460--Hb_000243_210 Hb_000866_460--Hb_002253_080 Hb_001279_120 Hb_001279_120 Hb_000866_460--Hb_001279_120 Hb_002267_140--Hb_008253_030 Hb_002267_140--Hb_001767_140 Hb_138596_010 Hb_138596_010 Hb_002267_140--Hb_138596_010 Hb_002276_240 Hb_002276_240 Hb_002267_140--Hb_002276_240 Hb_002843_120 Hb_002843_120 Hb_002267_140--Hb_002843_120 Hb_001318_070 Hb_001318_070 Hb_000243_210--Hb_001318_070 Hb_000099_040 Hb_000099_040 Hb_000243_210--Hb_000099_040 Hb_000174_060 Hb_000174_060 Hb_000243_210--Hb_000174_060 Hb_000671_070 Hb_000671_070 Hb_000243_210--Hb_000671_070 Hb_000243_210--Hb_002205_250 Hb_000879_040 Hb_000879_040 Hb_000243_210--Hb_000879_040 Hb_009767_080 Hb_009767_080 Hb_019430_020--Hb_009767_080 Hb_000661_130 Hb_000661_130 Hb_019430_020--Hb_000661_130 Hb_000665_230 Hb_000665_230 Hb_019430_020--Hb_000665_230 Hb_000321_150 Hb_000321_150 Hb_019430_020--Hb_000321_150 Hb_019430_020--Hb_002253_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.4307 37.7828 20.7287 21.4185 24.8608 25.4248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.5829 12.398 24.9564 17.6615 25.2953

CAGE analysis