Hb_001322_170

Information

Type -
Description -
Location Contig1322: 137765-140517
Sequence    

Annotation

kegg
ID sly:543906
description BI-1; Bax inhibitor
nr
ID XP_012070085.1
description PREDICTED: bax inhibitor 1-like [Jatropha curcas]
swissprot
ID Q9LD45
description Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1
trembl
ID A0A067KUW2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03473 PE=4 SV=1
Gene Ontology
ID GO:0016021
description bax inhibitor 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09281: 137858-140476
cDNA
(Sanger)
(ID:Location)		 012_A21.ab1: 137858-139644 , 035_E12.ab1: 138019-140087

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001322_170 0.0 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]
2 Hb_001243_040 0.088813501 - - PREDICTED: uncharacterized protein LOC104104316 [Nicotiana tomentosiformis]
3 Hb_000313_260 0.099767773 - - auxin:hydrogen symporter, putative [Ricinus communis]
4 Hb_018133_040 0.099884481 - - PREDICTED: probable apyrase 7 [Jatropha curcas]
5 Hb_001696_010 0.1009401645 - - PREDICTED: serine/threonine-protein kinase 38-like isoform X3 [Jatropha curcas]
6 Hb_001632_040 0.1027233888 - - PREDICTED: transmembrane protein adipocyte-associated 1 homolog isoform X1 [Jatropha curcas]
7 Hb_007304_110 0.1051783675 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 1 isoform X3 [Jatropha curcas]
8 Hb_003605_110 0.1054148372 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Jatropha curcas]
9 Hb_004117_100 0.1098102754 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
10 Hb_000739_310 0.1101514272 - - PREDICTED: uncharacterized protein LOC105643091 isoform X1 [Jatropha curcas]
11 Hb_002276_170 0.1141291286 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
12 Hb_000463_140 0.1176331392 - - Poly(rC)-binding protein, putative [Ricinus communis]
13 Hb_001019_190 0.1176519086 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000731_270 0.1194072665 - - PREDICTED: polyadenylate-binding protein RBP45B isoform X1 [Jatropha curcas]
15 Hb_000796_040 0.1199055524 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_002025_020 0.1204873048 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39710 [Jatropha curcas]
17 Hb_048476_170 0.1219816694 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II-like [Citrus sinensis]
18 Hb_000347_070 0.1234397611 - - conserved hypothetical protein [Ricinus communis]
19 Hb_034432_030 0.1236757787 - - PREDICTED: probable glycosyltransferase At5g20260 isoform X1 [Jatropha curcas]
20 Hb_146224_010 0.1240077764 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001322_170 Hb_001322_170 Hb_001243_040 Hb_001243_040 Hb_001322_170--Hb_001243_040 Hb_000313_260 Hb_000313_260 Hb_001322_170--Hb_000313_260 Hb_018133_040 Hb_018133_040 Hb_001322_170--Hb_018133_040 Hb_001696_010 Hb_001696_010 Hb_001322_170--Hb_001696_010 Hb_001632_040 Hb_001632_040 Hb_001322_170--Hb_001632_040 Hb_007304_110 Hb_007304_110 Hb_001322_170--Hb_007304_110 Hb_114310_090 Hb_114310_090 Hb_001243_040--Hb_114310_090 Hb_001243_040--Hb_018133_040 Hb_000731_270 Hb_000731_270 Hb_001243_040--Hb_000731_270 Hb_001243_040--Hb_001632_040 Hb_001243_040--Hb_001696_010 Hb_002276_170 Hb_002276_170 Hb_000313_260--Hb_002276_170 Hb_000116_500 Hb_000116_500 Hb_000313_260--Hb_000116_500 Hb_017700_010 Hb_017700_010 Hb_000313_260--Hb_017700_010 Hb_034432_030 Hb_034432_030 Hb_000313_260--Hb_034432_030 Hb_001047_220 Hb_001047_220 Hb_000313_260--Hb_001047_220 Hb_001379_110 Hb_001379_110 Hb_000313_260--Hb_001379_110 Hb_018133_040--Hb_002276_170 Hb_018133_040--Hb_114310_090 Hb_018133_040--Hb_001632_040 Hb_008096_010 Hb_008096_010 Hb_018133_040--Hb_008096_010 Hb_029510_050 Hb_029510_050 Hb_001696_010--Hb_029510_050 Hb_004225_050 Hb_004225_050 Hb_001696_010--Hb_004225_050 Hb_002740_180 Hb_002740_180 Hb_001696_010--Hb_002740_180 Hb_002809_050 Hb_002809_050 Hb_001696_010--Hb_002809_050 Hb_028089_010 Hb_028089_010 Hb_001696_010--Hb_028089_010 Hb_002685_210 Hb_002685_210 Hb_001696_010--Hb_002685_210 Hb_004414_060 Hb_004414_060 Hb_001632_040--Hb_004414_060 Hb_001632_040--Hb_002276_170 Hb_001632_040--Hb_114310_090 Hb_004907_080 Hb_004907_080 Hb_001632_040--Hb_004907_080 Hb_000342_130 Hb_000342_130 Hb_001632_040--Hb_000342_130 Hb_000363_460 Hb_000363_460 Hb_007304_110--Hb_000363_460 Hb_007943_100 Hb_007943_100 Hb_007304_110--Hb_007943_100 Hb_000358_150 Hb_000358_150 Hb_007304_110--Hb_000358_150 Hb_001136_100 Hb_001136_100 Hb_007304_110--Hb_001136_100 Hb_001136_090 Hb_001136_090 Hb_007304_110--Hb_001136_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
207.042 208.107 191.084 218.774 646.735 255.861
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
246.791 204.404 436.528 218.987 298.999

CAGE analysis