Hb_001331_050

Information

Type -
Description -
Location Contig1331: 57554-58542
Sequence    

Annotation

kegg
ID pda:103699953
description cationic peroxidase 1-like
nr
ID CAN61440.1
description hypothetical protein VITISV_022439 [Vitis vinifera]
swissprot
ID P16147
description Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2
trembl
ID A5BJV9
description Peroxidase OS=Vitis vinifera GN=VITISV_022439 PE=3 SV=1
Gene Ontology
ID GO:0005576
description cationic peroxidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001331_050 0.0 - - hypothetical protein VITISV_022439 [Vitis vinifera]
2 Hb_005643_010 0.0222711262 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
3 Hb_119441_010 0.0532543444 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
4 Hb_000369_150 0.0769096286 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
5 Hb_000879_100 0.0775188207 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
6 Hb_045810_010 0.0849709687 - - PREDICTED: laccase-12-like [Jatropha curcas]
7 Hb_006351_080 0.0895667742 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
8 Hb_000277_020 0.0955602465 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
9 Hb_000035_360 0.0967440556 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
10 Hb_007785_020 0.0977614596 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
11 Hb_000233_060 0.0982911913 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
12 Hb_066262_010 0.100806028 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
13 Hb_064855_010 0.1016639766 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_000128_010 0.1032220621 - - dimethylaniline monooxygenase, putative [Ricinus communis]
15 Hb_004586_380 0.1032434344 - - purine transporter, putative [Ricinus communis]
16 Hb_000656_360 0.1052912757 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
17 Hb_066262_020 0.1052972175 - - hypothetical protein JCGZ_14803 [Jatropha curcas]
18 Hb_011924_030 0.1064343879 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_004098_010 0.1071500665 - - -
20 Hb_003847_140 0.1071926391 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_001331_050 Hb_001331_050 Hb_005643_010 Hb_005643_010 Hb_001331_050--Hb_005643_010 Hb_119441_010 Hb_119441_010 Hb_001331_050--Hb_119441_010 Hb_000369_150 Hb_000369_150 Hb_001331_050--Hb_000369_150 Hb_000879_100 Hb_000879_100 Hb_001331_050--Hb_000879_100 Hb_045810_010 Hb_045810_010 Hb_001331_050--Hb_045810_010 Hb_006351_080 Hb_006351_080 Hb_001331_050--Hb_006351_080 Hb_005643_010--Hb_119441_010 Hb_005643_010--Hb_000879_100 Hb_005643_010--Hb_000369_150 Hb_066262_010 Hb_066262_010 Hb_005643_010--Hb_066262_010 Hb_000277_020 Hb_000277_020 Hb_005643_010--Hb_000277_020 Hb_119441_010--Hb_000369_150 Hb_119441_010--Hb_000879_100 Hb_004098_010 Hb_004098_010 Hb_119441_010--Hb_004098_010 Hb_000128_010 Hb_000128_010 Hb_119441_010--Hb_000128_010 Hb_000369_150--Hb_004098_010 Hb_000369_150--Hb_000879_100 Hb_000369_150--Hb_000128_010 Hb_176149_010 Hb_176149_010 Hb_000369_150--Hb_176149_010 Hb_000879_100--Hb_066262_010 Hb_003847_140 Hb_003847_140 Hb_000879_100--Hb_003847_140 Hb_007785_020 Hb_007785_020 Hb_045810_010--Hb_007785_020 Hb_002067_110 Hb_002067_110 Hb_045810_010--Hb_002067_110 Hb_045810_010--Hb_006351_080 Hb_000844_020 Hb_000844_020 Hb_045810_010--Hb_000844_020 Hb_000233_060 Hb_000233_060 Hb_045810_010--Hb_000233_060 Hb_004586_380 Hb_004586_380 Hb_006351_080--Hb_004586_380 Hb_006351_080--Hb_176149_010 Hb_006351_080--Hb_000128_010 Hb_006351_080--Hb_119441_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.499993 0 0.0276061 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0704218 0

CAGE analysis