Hb_001333_030

Information

Type -
Description -
Location Contig1333: 60801-63432
Sequence    

Annotation

kegg
ID tcc:TCM_016702
description Abscisic acid 8'-hydroxylase 1
nr
ID XP_007040870.1
description Abscisic acid 8'-hydroxylase 1 [Theobroma cacao]
swissprot
ID Q949P1
description Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP707A1 PE=2 SV=1
trembl
ID A0A061G714
description Abscisic acid 8'-hydroxylase 1 OS=Theobroma cacao GN=TCM_016702 PE=3 SV=1
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09477: 60937-61483 , PASA_asmbl_09479: 62266-63494
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001333_030 0.0 - - Abscisic acid 8'-hydroxylase 1 [Theobroma cacao]
2 Hb_021576_160 0.0940589144 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
3 Hb_011028_040 0.0960138026 - - receptor serine/threonine kinase, putative [Ricinus communis]
4 Hb_006153_020 0.0967148599 - - vacuolar invertase [Manihot esculenta]
5 Hb_001221_050 0.0974324025 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
6 Hb_003427_020 0.0982515293 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
7 Hb_001022_070 0.09935119 - - cell wall invertase [Manihot esculenta]
8 Hb_051408_010 0.1004611177 - - calcineurin-like phosphoesterase [Manihot esculenta]
9 Hb_005946_200 0.1063416738 - - hypothetical protein POPTR_0006s16210g [Populus trichocarpa]
10 Hb_002849_010 0.1182322225 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]
11 Hb_004314_020 0.1240840669 - - Auxin-responsive GH3 family protein [Theobroma cacao]
12 Hb_002626_060 0.1305171265 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
13 Hb_002303_050 0.1360836814 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor PTL-like [Populus euphratica]
14 Hb_000000_320 0.1398630503 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
15 Hb_001032_080 0.1429245964 - - Ankyrin repeat protein [Medicago truncatula]
16 Hb_029622_090 0.1431120806 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
17 Hb_007357_010 0.143741815 - - cytochrome P450, putative [Ricinus communis]
18 Hb_001675_350 0.1448617843 - - Avr9/Cf-9 rapidly elicited protein [Jatropha curcas]
19 Hb_002804_070 0.1456483304 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
20 Hb_004109_110 0.1458029041 - - dioxygenase family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_001333_030 Hb_001333_030 Hb_021576_160 Hb_021576_160 Hb_001333_030--Hb_021576_160 Hb_011028_040 Hb_011028_040 Hb_001333_030--Hb_011028_040 Hb_006153_020 Hb_006153_020 Hb_001333_030--Hb_006153_020 Hb_001221_050 Hb_001221_050 Hb_001333_030--Hb_001221_050 Hb_003427_020 Hb_003427_020 Hb_001333_030--Hb_003427_020 Hb_001022_070 Hb_001022_070 Hb_001333_030--Hb_001022_070 Hb_021576_160--Hb_003427_020 Hb_021576_160--Hb_001221_050 Hb_021576_160--Hb_006153_020 Hb_005946_200 Hb_005946_200 Hb_021576_160--Hb_005946_200 Hb_029622_090 Hb_029622_090 Hb_021576_160--Hb_029622_090 Hb_004314_020 Hb_004314_020 Hb_011028_040--Hb_004314_020 Hb_006873_010 Hb_006873_010 Hb_011028_040--Hb_006873_010 Hb_002849_010 Hb_002849_010 Hb_011028_040--Hb_002849_010 Hb_116103_010 Hb_116103_010 Hb_011028_040--Hb_116103_010 Hb_000904_110 Hb_000904_110 Hb_011028_040--Hb_000904_110 Hb_006153_020--Hb_001221_050 Hb_006153_020--Hb_005946_200 Hb_004109_110 Hb_004109_110 Hb_006153_020--Hb_004109_110 Hb_006002_020 Hb_006002_020 Hb_006153_020--Hb_006002_020 Hb_001221_050--Hb_005946_200 Hb_001221_050--Hb_003427_020 Hb_002804_070 Hb_002804_070 Hb_001221_050--Hb_002804_070 Hb_003427_020--Hb_001022_070 Hb_003427_020--Hb_002804_070 Hb_000000_320 Hb_000000_320 Hb_003427_020--Hb_000000_320 Hb_003427_020--Hb_005946_200 Hb_001022_070--Hb_000000_320 Hb_001953_010 Hb_001953_010 Hb_001022_070--Hb_001953_010 Hb_004474_070 Hb_004474_070 Hb_001022_070--Hb_004474_070 Hb_002303_050 Hb_002303_050 Hb_001022_070--Hb_002303_050 Hb_001022_070--Hb_005946_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.35632 1.67342 2.33815 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0231816 0 0.00924693 0.340178

CAGE analysis