Hb_001341_070

Information

Type -
Description -
Location Contig1341: 66103-74776
Sequence    

Annotation

kegg
ID rcu:RCOM_1399300
description hydrolase, putative
nr
ID XP_012064874.1
description PREDICTED: uncharacterized protein LOC105628138 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LIN2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05576 PE=4 SV=1
Gene Ontology
ID GO:0016787
description alpha beta-hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09688: 65762-65884 , PASA_asmbl_09689: 66264-74714
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001341_070 0.0 - - PREDICTED: uncharacterized protein LOC105628138 isoform X1 [Jatropha curcas]
2 Hb_000335_030 0.0780541117 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17033 [Jatropha curcas]
3 Hb_000556_090 0.0828865432 - - PREDICTED: uncharacterized protein LOC105643091 isoform X1 [Jatropha curcas]
4 Hb_000883_060 0.086718062 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Jatropha curcas]
5 Hb_029510_050 0.0880387321 - - PREDICTED: golgin candidate 5 [Jatropha curcas]
6 Hb_002685_210 0.0945914119 - - PREDICTED: BTB/POZ and MATH domain-containing protein 4 isoform X1 [Jatropha curcas]
7 Hb_003153_010 0.0976245039 - - PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
8 Hb_024128_020 0.0996640605 - - PREDICTED: vacuolar cation/proton exchanger 5-like isoform X1 [Jatropha curcas]
9 Hb_015941_020 0.0998742143 - - -
10 Hb_004052_170 0.1028623479 - - PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Jatropha curcas]
11 Hb_004108_160 0.1041776586 - - PREDICTED: myosin heavy chain, non-muscle-like [Jatropha curcas]
12 Hb_002496_010 0.1063044913 - - PREDICTED: protein GDAP2 homolog isoform X1 [Jatropha curcas]
13 Hb_029879_070 0.1070192531 - - PREDICTED: phospholipase A I [Jatropha curcas]
14 Hb_006275_070 0.1073502007 - - PREDICTED: general transcription factor IIF subunit 2 [Jatropha curcas]
15 Hb_001629_030 0.1074316317 - - PAP-specific phosphatase HAL2-like family protein [Populus trichocarpa]
16 Hb_002055_040 0.1076660388 - - PREDICTED: large subunit GTPase 1 homolog [Jatropha curcas]
17 Hb_002374_240 0.1077786488 - - nucellin, putative [Ricinus communis]
18 Hb_001671_010 0.1077789265 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
19 Hb_001696_010 0.1082855085 - - PREDICTED: serine/threonine-protein kinase 38-like isoform X3 [Jatropha curcas]
20 Hb_165928_040 0.108409194 - - PREDICTED: ERAD-associated E3 ubiquitin-protein ligase component HRD3A [Jatropha curcas]

Gene co-expression network

sample Hb_001341_070 Hb_001341_070 Hb_000335_030 Hb_000335_030 Hb_001341_070--Hb_000335_030 Hb_000556_090 Hb_000556_090 Hb_001341_070--Hb_000556_090 Hb_000883_060 Hb_000883_060 Hb_001341_070--Hb_000883_060 Hb_029510_050 Hb_029510_050 Hb_001341_070--Hb_029510_050 Hb_002685_210 Hb_002685_210 Hb_001341_070--Hb_002685_210 Hb_003153_010 Hb_003153_010 Hb_001341_070--Hb_003153_010 Hb_004191_020 Hb_004191_020 Hb_000335_030--Hb_004191_020 Hb_000335_030--Hb_029510_050 Hb_010883_040 Hb_010883_040 Hb_000335_030--Hb_010883_040 Hb_006478_020 Hb_006478_020 Hb_000335_030--Hb_006478_020 Hb_000676_250 Hb_000676_250 Hb_000335_030--Hb_000676_250 Hb_004108_160 Hb_004108_160 Hb_000556_090--Hb_004108_160 Hb_004052_170 Hb_004052_170 Hb_000556_090--Hb_004052_170 Hb_000556_090--Hb_003153_010 Hb_011228_010 Hb_011228_010 Hb_000556_090--Hb_011228_010 Hb_001818_100 Hb_001818_100 Hb_000556_090--Hb_001818_100 Hb_000340_230 Hb_000340_230 Hb_000556_090--Hb_000340_230 Hb_000010_340 Hb_000010_340 Hb_000883_060--Hb_000010_340 Hb_001671_010 Hb_001671_010 Hb_000883_060--Hb_001671_010 Hb_015941_020 Hb_015941_020 Hb_000883_060--Hb_015941_020 Hb_006711_100 Hb_006711_100 Hb_000883_060--Hb_006711_100 Hb_000913_020 Hb_000913_020 Hb_000883_060--Hb_000913_020 Hb_000254_090 Hb_000254_090 Hb_029510_050--Hb_000254_090 Hb_029879_070 Hb_029879_070 Hb_029510_050--Hb_029879_070 Hb_001357_020 Hb_001357_020 Hb_029510_050--Hb_001357_020 Hb_002518_260 Hb_002518_260 Hb_029510_050--Hb_002518_260 Hb_005686_090 Hb_005686_090 Hb_029510_050--Hb_005686_090 Hb_029510_050--Hb_002685_210 Hb_000172_290 Hb_000172_290 Hb_002685_210--Hb_000172_290 Hb_002685_210--Hb_029879_070 Hb_005490_030 Hb_005490_030 Hb_002685_210--Hb_005490_030 Hb_002685_210--Hb_000254_090 Hb_000631_080 Hb_000631_080 Hb_002685_210--Hb_000631_080 Hb_003153_010--Hb_004108_160 Hb_003376_230 Hb_003376_230 Hb_003153_010--Hb_003376_230 Hb_002769_030 Hb_002769_030 Hb_003153_010--Hb_002769_030 Hb_008421_020 Hb_008421_020 Hb_003153_010--Hb_008421_020 Hb_000184_170 Hb_000184_170 Hb_003153_010--Hb_000184_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6431 7.07741 10.9928 13.6064 12.5176 13.9302
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.017 10.3647 26.3798 11.9637 26.6322

CAGE analysis