Hb_001345_020

Information

Type -
Description -
Location Contig1345: 41414-42909
Sequence    

Annotation

kegg
ID pop:POPTR_0007s10400g
description hypothetical protein
nr
ID XP_006380680.1
description hypothetical protein POPTR_0007s10400g [Populus trichocarpa]
swissprot
ID Q27712
description Cytochrome P450 2L1 OS=Panulirus argus GN=CYP2L1 PE=1 SV=1
trembl
ID M1CBY6
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024951 PE=3 SV=1
Gene Ontology
ID GO:0005506
description isoflavone 2 -hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09761: 23176-43022
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001345_020 0.0 - - hypothetical protein POPTR_0007s10400g [Populus trichocarpa]
2 Hb_001349_020 0.0890518767 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
3 Hb_014250_010 0.1032850208 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
4 Hb_002503_050 0.1069825858 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
5 Hb_005679_110 0.1081306235 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
6 Hb_001638_150 0.1137652253 - - acyltransferase, putative [Ricinus communis]
7 Hb_000567_060 0.1141166321 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
8 Hb_021346_020 0.1154741425 - - hypothetical protein JCGZ_26746 [Jatropha curcas]
9 Hb_000096_210 0.1210451373 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
10 Hb_003881_020 0.1223665709 - - PREDICTED: stellacyanin-like [Jatropha curcas]
11 Hb_002871_050 0.1229439607 transcription factor TF Family: ARF auxin response factor 1 family protein [Populus trichocarpa]
12 Hb_000018_120 0.1234003778 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_015001_030 0.123634487 - - inosine-uridine preferring nucleoside hydrolase family protein [Populus trichocarpa]
14 Hb_033312_050 0.1247962836 - - PREDICTED: uncharacterized protein LOC105638598, partial [Jatropha curcas]
15 Hb_001454_290 0.1248724628 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
16 Hb_005766_010 0.1274289205 - - serine carboxypeptidase, putative [Ricinus communis]
17 Hb_005730_070 0.1285550087 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
18 Hb_000696_250 0.1306377749 - - PREDICTED: patellin-6 [Jatropha curcas]
19 Hb_000017_320 0.1315275387 transcription factor TF Family: bHLH PREDICTED: transcription factor GLABRA 3-like isoform X1 [Jatropha curcas]
20 Hb_083412_010 0.1350797388 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]

Gene co-expression network

sample Hb_001345_020 Hb_001345_020 Hb_001349_020 Hb_001349_020 Hb_001345_020--Hb_001349_020 Hb_014250_010 Hb_014250_010 Hb_001345_020--Hb_014250_010 Hb_002503_050 Hb_002503_050 Hb_001345_020--Hb_002503_050 Hb_005679_110 Hb_005679_110 Hb_001345_020--Hb_005679_110 Hb_001638_150 Hb_001638_150 Hb_001345_020--Hb_001638_150 Hb_000567_060 Hb_000567_060 Hb_001345_020--Hb_000567_060 Hb_001349_020--Hb_005679_110 Hb_000017_320 Hb_000017_320 Hb_001349_020--Hb_000017_320 Hb_005730_070 Hb_005730_070 Hb_001349_020--Hb_005730_070 Hb_000696_250 Hb_000696_250 Hb_001349_020--Hb_000696_250 Hb_002003_010 Hb_002003_010 Hb_001349_020--Hb_002003_010 Hb_000096_210 Hb_000096_210 Hb_014250_010--Hb_000096_210 Hb_009554_030 Hb_009554_030 Hb_014250_010--Hb_009554_030 Hb_015001_030 Hb_015001_030 Hb_014250_010--Hb_015001_030 Hb_005766_010 Hb_005766_010 Hb_014250_010--Hb_005766_010 Hb_000866_190 Hb_000866_190 Hb_014250_010--Hb_000866_190 Hb_014250_010--Hb_001638_150 Hb_000189_160 Hb_000189_160 Hb_002503_050--Hb_000189_160 Hb_002503_050--Hb_014250_010 Hb_000046_430 Hb_000046_430 Hb_002503_050--Hb_000046_430 Hb_000760_080 Hb_000760_080 Hb_002503_050--Hb_000760_080 Hb_002503_050--Hb_009554_030 Hb_002871_050 Hb_002871_050 Hb_005679_110--Hb_002871_050 Hb_000696_030 Hb_000696_030 Hb_005679_110--Hb_000696_030 Hb_001776_070 Hb_001776_070 Hb_005679_110--Hb_001776_070 Hb_000482_070 Hb_000482_070 Hb_005679_110--Hb_000482_070 Hb_001638_150--Hb_015001_030 Hb_001440_010 Hb_001440_010 Hb_001638_150--Hb_001440_010 Hb_000010_440 Hb_000010_440 Hb_001638_150--Hb_000010_440 Hb_003092_020 Hb_003092_020 Hb_001638_150--Hb_003092_020 Hb_003656_090 Hb_003656_090 Hb_001638_150--Hb_003656_090 Hb_000018_090 Hb_000018_090 Hb_000567_060--Hb_000018_090 Hb_003881_020 Hb_003881_020 Hb_000567_060--Hb_003881_020 Hb_000567_060--Hb_002871_050 Hb_137272_010 Hb_137272_010 Hb_000567_060--Hb_137272_010 Hb_000567_060--Hb_000482_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.26644 11.9756 8.01154 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.18414 0.217104 0 10.3212 3.8177

CAGE analysis