Hb_001348_110

Information

Type -
Description -
Location Contig1348: 98036-99678
Sequence    

Annotation

kegg
ID rcu:RCOM_1032330
description Esterase precursor, putative
nr
ID XP_012078361.1
description PREDICTED: esterase-like [Jatropha curcas]
swissprot
ID Q7Y1X1
description Esterase OS=Hevea brasiliensis PE=1 SV=1
trembl
ID B9RJ92
description Esterase, putative OS=Ricinus communis GN=RCOM_1032330 PE=4 SV=1
Gene Ontology
ID GO:0016788
description early nodulin 8 precursor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001348_110 0.0 - - PREDICTED: esterase-like [Jatropha curcas]
2 Hb_008954_010 0.0533334825 - - -
3 Hb_000804_030 0.0744639431 - - Protein C14orf111, putative [Ricinus communis]
4 Hb_001520_020 0.1356811579 - - PREDICTED: metal tolerance protein C2 [Jatropha curcas]
5 Hb_000011_340 0.1370202861 - - PREDICTED: protein LURP-one-related 11-like [Jatropha curcas]
6 Hb_075060_030 0.2106397142 - - PREDICTED: uncharacterized protein LOC104593656 [Nelumbo nucifera]
7 Hb_000270_800 0.2106590357 - - -
8 Hb_018609_040 0.2106814743 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
9 Hb_034587_030 0.2113793893 - - -
10 Hb_001140_240 0.2143707084 - - metal ion binding protein, putative [Ricinus communis]
11 Hb_031284_050 0.215099131 - - -
12 Hb_009954_050 0.2288152511 - - PREDICTED: uncharacterized protein LOC104611877 isoform X2 [Nelumbo nucifera]
13 Hb_002903_010 0.2313734998 - - 60S ribosomal protein L37-3 [Morus notabilis]
14 Hb_002997_130 0.2325105495 - - -
15 Hb_028462_010 0.2326713409 - - PREDICTED: uncharacterized protein LOC101509514 [Cicer arietinum]
16 Hb_123098_010 0.2326725377 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_004899_270 0.2326816261 - - PREDICTED: beta-galactosidase 15-like [Cucumis sativus]
18 Hb_000111_160 0.2326939483 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
19 Hb_018006_020 0.2327211107 - - PREDICTED: uncharacterized protein LOC105641417 [Jatropha curcas]
20 Hb_006053_010 0.2327287319 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_001348_110 Hb_001348_110 Hb_008954_010 Hb_008954_010 Hb_001348_110--Hb_008954_010 Hb_000804_030 Hb_000804_030 Hb_001348_110--Hb_000804_030 Hb_001520_020 Hb_001520_020 Hb_001348_110--Hb_001520_020 Hb_000011_340 Hb_000011_340 Hb_001348_110--Hb_000011_340 Hb_075060_030 Hb_075060_030 Hb_001348_110--Hb_075060_030 Hb_000270_800 Hb_000270_800 Hb_001348_110--Hb_000270_800 Hb_008954_010--Hb_000804_030 Hb_008954_010--Hb_001520_020 Hb_008954_010--Hb_000011_340 Hb_001140_240 Hb_001140_240 Hb_008954_010--Hb_001140_240 Hb_005725_110 Hb_005725_110 Hb_008954_010--Hb_005725_110 Hb_002903_010 Hb_002903_010 Hb_000804_030--Hb_002903_010 Hb_031284_050 Hb_031284_050 Hb_000804_030--Hb_031284_050 Hb_034587_030 Hb_034587_030 Hb_000804_030--Hb_034587_030 Hb_018609_040 Hb_018609_040 Hb_000804_030--Hb_018609_040 Hb_001520_020--Hb_000011_340 Hb_000487_280 Hb_000487_280 Hb_001520_020--Hb_000487_280 Hb_001520_020--Hb_000804_030 Hb_009954_050 Hb_009954_050 Hb_001520_020--Hb_009954_050 Hb_000011_340--Hb_000487_280 Hb_000011_340--Hb_000804_030 Hb_116349_010 Hb_116349_010 Hb_000011_340--Hb_116349_010 Hb_075060_030--Hb_000270_800 Hb_075060_030--Hb_018609_040 Hb_075060_030--Hb_034587_030 Hb_075060_030--Hb_031284_050 Hb_002392_050 Hb_002392_050 Hb_075060_030--Hb_002392_050 Hb_000869_110 Hb_000869_110 Hb_075060_030--Hb_000869_110 Hb_000270_800--Hb_018609_040 Hb_000270_800--Hb_034587_030 Hb_000270_800--Hb_031284_050 Hb_000270_800--Hb_002392_050 Hb_000270_800--Hb_000869_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.126636 0.166019 0 0.0266189 0

CAGE analysis