Hb_001357_220

Information

Type -
Description -
Location Contig1357: 158941-160295
Sequence    

Annotation

kegg
ID rcu:RCOM_0752440
description dopamine beta-monooxygenase, putative
nr
ID XP_002529454.1
description dopamine beta-monooxygenase, putative [Ricinus communis]
swissprot
ID Q9LSE7
description Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis thaliana GN=At3g25290 PE=2 SV=1
trembl
ID B9STY5
description Dopamine beta-monooxygenase, putative OS=Ricinus communis GN=RCOM_0752440 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09929: 158755-160328
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001357_220 0.0 - - dopamine beta-monooxygenase, putative [Ricinus communis]
2 Hb_003464_100 0.1213064069 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
3 Hb_007292_060 0.1224919576 - - PREDICTED: uncharacterized protein LOC105632853 [Jatropha curcas]
4 Hb_001006_300 0.126066455 - - lipid binding protein, putative [Ricinus communis]
5 Hb_001898_030 0.1282462323 - - protein kinase-coding resistance protein [Nicotiana repanda]
6 Hb_140627_040 0.1284452633 - - PREDICTED: vesicle-associated protein 4-1-like [Jatropha curcas]
7 Hb_003680_240 0.1328934048 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
8 Hb_090210_010 0.1334849498 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
9 Hb_017061_010 0.1353270041 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
10 Hb_135757_030 0.1354343427 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
11 Hb_000964_120 0.1367140816 - - DNA-damage-inducible protein f, putative [Ricinus communis]
12 Hb_136944_010 0.1381765757 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
13 Hb_015978_020 0.1387321898 - - Multidrug resistance protein ABC transporter family protein, putative [Theobroma cacao]
14 Hb_001818_010 0.1400554775 - - Disease resistance response protein, putative [Ricinus communis]
15 Hb_003598_050 0.1405097413 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
16 Hb_002260_140 0.1413059497 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003858_070 0.1418612196 - - PREDICTED: uncharacterized protein LOC105647879 [Jatropha curcas]
18 Hb_004102_180 0.1440748012 - - zinc finger family protein [Populus trichocarpa]
19 Hb_003090_220 0.1441856835 - - PREDICTED: copper transporter 4 [Jatropha curcas]
20 Hb_000175_600 0.1445384701 - - PREDICTED: TATA-binding protein-associated factor 2N isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001357_220 Hb_001357_220 Hb_003464_100 Hb_003464_100 Hb_001357_220--Hb_003464_100 Hb_007292_060 Hb_007292_060 Hb_001357_220--Hb_007292_060 Hb_001006_300 Hb_001006_300 Hb_001357_220--Hb_001006_300 Hb_001898_030 Hb_001898_030 Hb_001357_220--Hb_001898_030 Hb_140627_040 Hb_140627_040 Hb_001357_220--Hb_140627_040 Hb_003680_240 Hb_003680_240 Hb_001357_220--Hb_003680_240 Hb_000175_600 Hb_000175_600 Hb_003464_100--Hb_000175_600 Hb_004102_180 Hb_004102_180 Hb_003464_100--Hb_004102_180 Hb_069384_010 Hb_069384_010 Hb_003464_100--Hb_069384_010 Hb_002326_090 Hb_002326_090 Hb_003464_100--Hb_002326_090 Hb_000236_210 Hb_000236_210 Hb_003464_100--Hb_000236_210 Hb_011218_010 Hb_011218_010 Hb_003464_100--Hb_011218_010 Hb_000964_120 Hb_000964_120 Hb_007292_060--Hb_000964_120 Hb_007292_060--Hb_002326_090 Hb_090210_010 Hb_090210_010 Hb_007292_060--Hb_090210_010 Hb_007292_060--Hb_000175_600 Hb_007292_060--Hb_004102_180 Hb_007292_060--Hb_011218_010 Hb_017061_010 Hb_017061_010 Hb_001006_300--Hb_017061_010 Hb_003858_070 Hb_003858_070 Hb_001006_300--Hb_003858_070 Hb_001006_300--Hb_001898_030 Hb_013399_060 Hb_013399_060 Hb_001006_300--Hb_013399_060 Hb_001006_300--Hb_000964_120 Hb_005144_150 Hb_005144_150 Hb_001006_300--Hb_005144_150 Hb_002304_110 Hb_002304_110 Hb_001898_030--Hb_002304_110 Hb_001898_030--Hb_017061_010 Hb_001898_030--Hb_090210_010 Hb_001898_030--Hb_002326_090 Hb_001898_030--Hb_007292_060 Hb_034713_010 Hb_034713_010 Hb_140627_040--Hb_034713_010 Hb_140627_040--Hb_003680_240 Hb_009367_070 Hb_009367_070 Hb_140627_040--Hb_009367_070 Hb_051212_020 Hb_051212_020 Hb_140627_040--Hb_051212_020 Hb_000207_060 Hb_000207_060 Hb_140627_040--Hb_000207_060 Hb_009062_020 Hb_009062_020 Hb_140627_040--Hb_009062_020 Hb_002686_220 Hb_002686_220 Hb_003680_240--Hb_002686_220 Hb_003598_050 Hb_003598_050 Hb_003680_240--Hb_003598_050 Hb_006153_140 Hb_006153_140 Hb_003680_240--Hb_006153_140 Hb_000331_630 Hb_000331_630 Hb_003680_240--Hb_000331_630 Hb_003680_240--Hb_017061_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0912004 0.417249 2.46614 0.0512944 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0416929 0 0 0.052573 0.203355

CAGE analysis