Hb_001357_290

Information

Type -
Description -
Location Contig1357: 221705-222666
Sequence    

Annotation

kegg
ID mdm:103443257
description uncharacterized LOC103443257
nr
ID XP_012070866.1
description PREDICTED: uncharacterized protein LOC105632986 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9I171
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s09140g PE=4 SV=1
Gene Ontology
ID GO:0005783
description b-cell receptor-associated protein 31

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09937: 221932-222611
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001357_290 0.0 - - PREDICTED: uncharacterized protein LOC105632986 [Jatropha curcas]
2 Hb_000227_360 0.0715262972 - - PREDICTED: mavicyanin [Jatropha curcas]
3 Hb_011344_040 0.0729595039 - - PREDICTED: 21 kDa protein [Jatropha curcas]
4 Hb_000130_250 0.0758899246 - - PREDICTED: protein trichome birefringence-like 31 [Jatropha curcas]
5 Hb_000347_060 0.0835698873 - - PREDICTED: uncharacterized protein LOC105631356 [Jatropha curcas]
6 Hb_061700_010 0.0885362186 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
7 Hb_000392_350 0.094796104 - - zinc finger protein, putative [Ricinus communis]
8 Hb_142204_010 0.0987653095 - - pyruvate decarboxylase [Saccharum officinarum]
9 Hb_050160_010 0.099655467 - - hypothetical protein JCGZ_24934 [Jatropha curcas]
10 Hb_108090_010 0.1028108307 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001456_030 0.1039314936 - - PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2 [Vitis vinifera]
12 Hb_152868_020 0.1039679975 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
13 Hb_000421_040 0.1049276466 - - Peptide transporter, putative [Ricinus communis]
14 Hb_010172_040 0.1053115812 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
15 Hb_003858_010 0.1054251612 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
16 Hb_000414_090 0.1062600892 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005440_040 0.1069129658 - - PREDICTED: microtubule-associated protein 70-5 [Jatropha curcas]
18 Hb_010193_020 0.1074469268 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
19 Hb_003376_060 0.1078500975 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9 isoform X1 [Jatropha curcas]
20 Hb_000707_090 0.1078809673 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]

Gene co-expression network

sample Hb_001357_290 Hb_001357_290 Hb_000227_360 Hb_000227_360 Hb_001357_290--Hb_000227_360 Hb_011344_040 Hb_011344_040 Hb_001357_290--Hb_011344_040 Hb_000130_250 Hb_000130_250 Hb_001357_290--Hb_000130_250 Hb_000347_060 Hb_000347_060 Hb_001357_290--Hb_000347_060 Hb_061700_010 Hb_061700_010 Hb_001357_290--Hb_061700_010 Hb_000392_350 Hb_000392_350 Hb_001357_290--Hb_000392_350 Hb_108090_010 Hb_108090_010 Hb_000227_360--Hb_108090_010 Hb_005440_040 Hb_005440_040 Hb_000227_360--Hb_005440_040 Hb_003858_010 Hb_003858_010 Hb_000227_360--Hb_003858_010 Hb_001456_030 Hb_001456_030 Hb_000227_360--Hb_001456_030 Hb_000227_360--Hb_011344_040 Hb_185608_010 Hb_185608_010 Hb_011344_040--Hb_185608_010 Hb_010193_020 Hb_010193_020 Hb_011344_040--Hb_010193_020 Hb_011344_040--Hb_003858_010 Hb_057862_010 Hb_057862_010 Hb_011344_040--Hb_057862_010 Hb_000130_250--Hb_061700_010 Hb_000130_250--Hb_000227_360 Hb_000130_250--Hb_011344_040 Hb_000130_250--Hb_000347_060 Hb_003376_060 Hb_003376_060 Hb_000130_250--Hb_003376_060 Hb_002662_070 Hb_002662_070 Hb_000347_060--Hb_002662_070 Hb_010166_010 Hb_010166_010 Hb_000347_060--Hb_010166_010 Hb_005686_040 Hb_005686_040 Hb_000347_060--Hb_005686_040 Hb_001935_060 Hb_001935_060 Hb_000347_060--Hb_001935_060 Hb_010288_010 Hb_010288_010 Hb_000347_060--Hb_010288_010 Hb_001377_220 Hb_001377_220 Hb_000347_060--Hb_001377_220 Hb_061700_010--Hb_108090_010 Hb_000421_040 Hb_000421_040 Hb_061700_010--Hb_000421_040 Hb_142204_010 Hb_142204_010 Hb_061700_010--Hb_142204_010 Hb_000172_270 Hb_000172_270 Hb_061700_010--Hb_000172_270 Hb_000557_080 Hb_000557_080 Hb_061700_010--Hb_000557_080 Hb_000707_090 Hb_000707_090 Hb_061700_010--Hb_000707_090 Hb_000392_350--Hb_000421_040 Hb_010172_040 Hb_010172_040 Hb_000392_350--Hb_010172_040 Hb_000392_350--Hb_000707_090 Hb_000392_350--Hb_061700_010 Hb_002809_180 Hb_002809_180 Hb_000392_350--Hb_002809_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0989508 1.85971 12.4424 0.0484782 0.0430025
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112089 0 0 0.108847 7.2438

CAGE analysis