Hb_001369_100

Information

Type -
Description -
Location Contig1369: 69977-74104
Sequence    

Annotation

kegg
ID pop:POPTR_0004s24200g
description quinone oxidoreductase-like family protein
nr
ID KDP22449.1
description hypothetical protein JCGZ_26280 [Jatropha curcas]
swissprot
ID P28304
description Quinone oxidoreductase 1 OS=Escherichia coli (strain K12) GN=qorA PE=1 SV=1
trembl
ID A0A067JSC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26280 PE=4 SV=1
Gene Ontology
ID GO:0005829
description probable quinone oxidoreductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001369_100 0.0 - - hypothetical protein JCGZ_26280 [Jatropha curcas]
2 Hb_009079_050 0.0849940498 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
3 Hb_002817_040 0.0903655908 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
4 Hb_005563_010 0.110861338 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
5 Hb_001628_120 0.1142178298 - - putative ascorbate peroxidase, partial [Taraxacum brevicorniculatum]
6 Hb_000096_190 0.1145563755 - - unknown [Lotus japonicus]
7 Hb_000139_300 0.1148340531 - - hypothetical protein POPTR_0008s19950g [Populus trichocarpa]
8 Hb_000049_180 0.1158147127 - - aromatic amino acid decarboxylase, putative [Ricinus communis]
9 Hb_001976_030 0.1193992451 - - PREDICTED: protein NETWORKED 2D-like isoform X2 [Jatropha curcas]
10 Hb_000749_020 0.1196013821 - - Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao]
11 Hb_000086_210 0.1204341595 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_002759_120 0.1213651599 - - conserved hypothetical protein [Ricinus communis]
13 Hb_026549_070 0.1260012318 - - PREDICTED: UDP-glucuronic acid decarboxylase 1 [Jatropha curcas]
14 Hb_004306_110 0.1355242514 transcription factor TF Family: Trihelix PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Jatropha curcas]
15 Hb_121089_040 0.1355264699 - - PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]
16 Hb_005074_040 0.1360520656 - - ATP binding protein, putative [Ricinus communis]
17 Hb_001195_660 0.139199153 - - metalloendopeptidase, putative [Ricinus communis]
18 Hb_000566_010 0.1393503629 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
19 Hb_005228_040 0.1415491421 - - PREDICTED: uncharacterized protein At4g06598-like [Jatropha curcas]
20 Hb_158092_100 0.1419129729 - - PREDICTED: uncharacterized protein LOC105647301 [Jatropha curcas]

Gene co-expression network

sample Hb_001369_100 Hb_001369_100 Hb_009079_050 Hb_009079_050 Hb_001369_100--Hb_009079_050 Hb_002817_040 Hb_002817_040 Hb_001369_100--Hb_002817_040 Hb_005563_010 Hb_005563_010 Hb_001369_100--Hb_005563_010 Hb_001628_120 Hb_001628_120 Hb_001369_100--Hb_001628_120 Hb_000096_190 Hb_000096_190 Hb_001369_100--Hb_000096_190 Hb_000139_300 Hb_000139_300 Hb_001369_100--Hb_000139_300 Hb_026549_070 Hb_026549_070 Hb_009079_050--Hb_026549_070 Hb_009079_050--Hb_000139_300 Hb_009079_050--Hb_002817_040 Hb_002164_020 Hb_002164_020 Hb_009079_050--Hb_002164_020 Hb_001195_660 Hb_001195_660 Hb_009079_050--Hb_001195_660 Hb_000749_020 Hb_000749_020 Hb_002817_040--Hb_000749_020 Hb_000108_150 Hb_000108_150 Hb_002817_040--Hb_000108_150 Hb_000612_090 Hb_000612_090 Hb_002817_040--Hb_000612_090 Hb_002028_180 Hb_002028_180 Hb_002817_040--Hb_002028_180 Hb_001976_030 Hb_001976_030 Hb_005563_010--Hb_001976_030 Hb_000049_180 Hb_000049_180 Hb_005563_010--Hb_000049_180 Hb_000086_210 Hb_000086_210 Hb_005563_010--Hb_000086_210 Hb_005563_010--Hb_000139_300 Hb_005563_010--Hb_001628_120 Hb_001628_120--Hb_001976_030 Hb_000684_390 Hb_000684_390 Hb_001628_120--Hb_000684_390 Hb_042083_040 Hb_042083_040 Hb_001628_120--Hb_042083_040 Hb_001628_120--Hb_000049_180 Hb_007441_310 Hb_007441_310 Hb_001628_120--Hb_007441_310 Hb_000397_150 Hb_000397_150 Hb_001628_120--Hb_000397_150 Hb_000096_190--Hb_000049_180 Hb_002759_120 Hb_002759_120 Hb_000096_190--Hb_002759_120 Hb_000096_190--Hb_042083_040 Hb_000049_160 Hb_000049_160 Hb_000096_190--Hb_000049_160 Hb_000962_070 Hb_000962_070 Hb_000096_190--Hb_000962_070 Hb_002182_020 Hb_002182_020 Hb_000096_190--Hb_002182_020 Hb_000139_300--Hb_000086_210 Hb_000139_300--Hb_026549_070 Hb_005074_040 Hb_005074_040 Hb_000139_300--Hb_005074_040 Hb_004306_110 Hb_004306_110 Hb_000139_300--Hb_004306_110 Hb_000808_150 Hb_000808_150 Hb_000139_300--Hb_000808_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0261042 0.0383333 0.254601 0.324723 0.0797038 0.0227429
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0478175 0.0752199 0.0694335 0.0604323 0.385959

CAGE analysis