Hb_001369_260

Information

Type -
Description -
Location Contig1369: 266019-268864
Sequence    

Annotation

kegg
ID rcu:RCOM_1500670
description aldo-keto reductase, putative (EC:1.1.1.149)
nr
ID XP_002510968.1
description aldo-keto reductase, putative [Ricinus communis]
swissprot
ID Q9SQ64
description Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=COR2 PE=1 SV=1
trembl
ID B9R9U3
description Aldo-keto reductase, putative OS=Ricinus communis GN=RCOM_1500670 PE=4 SV=1
Gene Ontology
ID GO:0047006
description aldo-keto reductase family 4 member c9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10164: 268115-268242
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001369_260 0.0 - - aldo-keto reductase, putative [Ricinus communis]
2 Hb_003992_110 0.2157668561 - - hypothetical protein VITISV_016971 [Vitis vinifera]
3 Hb_092449_010 0.2264259186 - - -
4 Hb_012324_020 0.2635410576 - - -
5 Hb_094721_010 0.2640368654 - - PREDICTED: uncharacterized protein LOC104809818, partial [Tarenaya hassleriana]
6 Hb_020247_060 0.2690934217 - - UDP-glucoronosyl/UDP-glucosyl transferase family protein [Populus trichocarpa]
7 Hb_003158_020 0.2716162124 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
8 Hb_000003_770 0.2916042461 - - -
9 Hb_001379_130 0.2941874284 - - PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Jatropha curcas]
10 Hb_005408_040 0.3061867886 - - -
11 Hb_000736_010 0.3063873269 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
12 Hb_000179_150 0.3075755585 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
13 Hb_088496_010 0.3077526362 - - PREDICTED: uncharacterized protein LOC104889111 [Beta vulgaris subsp. vulgaris]
14 Hb_001277_210 0.3102735869 - - -
15 Hb_007451_060 0.3118515139 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
16 Hb_008667_050 0.312404779 - - PREDICTED: serine/threonine-protein kinase HT1-like [Malus domestica]
17 Hb_145890_010 0.3142956269 - - unnamed protein product [Vitis vinifera]
18 Hb_111347_010 0.3156545923 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
19 Hb_004297_030 0.3179621633 - - PREDICTED: uncharacterized protein LOC105633198 [Jatropha curcas]
20 Hb_000189_360 0.3185029515 - - Calcium-transporting ATPase 12, plasma membrane-type [Morus notabilis]

Gene co-expression network

sample Hb_001369_260 Hb_001369_260 Hb_003992_110 Hb_003992_110 Hb_001369_260--Hb_003992_110 Hb_092449_010 Hb_092449_010 Hb_001369_260--Hb_092449_010 Hb_012324_020 Hb_012324_020 Hb_001369_260--Hb_012324_020 Hb_094721_010 Hb_094721_010 Hb_001369_260--Hb_094721_010 Hb_020247_060 Hb_020247_060 Hb_001369_260--Hb_020247_060 Hb_003158_020 Hb_003158_020 Hb_001369_260--Hb_003158_020 Hb_145890_010 Hb_145890_010 Hb_003992_110--Hb_145890_010 Hb_000189_360 Hb_000189_360 Hb_003992_110--Hb_000189_360 Hb_002741_030 Hb_002741_030 Hb_003992_110--Hb_002741_030 Hb_000179_150 Hb_000179_150 Hb_003992_110--Hb_000179_150 Hb_007451_060 Hb_007451_060 Hb_003992_110--Hb_007451_060 Hb_001277_210 Hb_001277_210 Hb_092449_010--Hb_001277_210 Hb_001016_070 Hb_001016_070 Hb_092449_010--Hb_001016_070 Hb_092449_010--Hb_000179_150 Hb_078604_010 Hb_078604_010 Hb_092449_010--Hb_078604_010 Hb_092449_010--Hb_003992_110 Hb_012324_020--Hb_094721_010 Hb_000003_770 Hb_000003_770 Hb_012324_020--Hb_000003_770 Hb_088496_010 Hb_088496_010 Hb_012324_020--Hb_088496_010 Hb_001379_130 Hb_001379_130 Hb_012324_020--Hb_001379_130 Hb_004297_030 Hb_004297_030 Hb_012324_020--Hb_004297_030 Hb_005408_040 Hb_005408_040 Hb_012324_020--Hb_005408_040 Hb_094721_010--Hb_000003_770 Hb_094721_010--Hb_088496_010 Hb_094721_010--Hb_004297_030 Hb_094721_010--Hb_001379_130 Hb_094721_010--Hb_005408_040 Hb_000367_170 Hb_000367_170 Hb_020247_060--Hb_000367_170 Hb_020247_060--Hb_094721_010 Hb_020247_060--Hb_012324_020 Hb_000039_170 Hb_000039_170 Hb_020247_060--Hb_000039_170 Hb_020247_060--Hb_145890_010 Hb_001007_050 Hb_001007_050 Hb_020247_060--Hb_001007_050 Hb_111347_010 Hb_111347_010 Hb_003158_020--Hb_111347_010 Hb_001998_060 Hb_001998_060 Hb_003158_020--Hb_001998_060 Hb_039112_010 Hb_039112_010 Hb_003158_020--Hb_039112_010 Hb_000869_110 Hb_000869_110 Hb_003158_020--Hb_000869_110 Hb_002392_050 Hb_002392_050 Hb_003158_020--Hb_002392_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0237419 0 0 0 0.0208366
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0541854 0.0852287 0 0 0

CAGE analysis