Hb_001377_220

Information

Type -
Description -
Location Contig1377: 228052-230558
Sequence    

Annotation

kegg
ID rcu:RCOM_0718420
description dopamine beta-monooxygenase, putative
nr
ID XP_002523350.1
description dopamine beta-monooxygenase, putative [Ricinus communis]
swissprot
ID Q9M363
description Cytochrome b561 and DOMON domain-containing protein At3g61750 OS=Arabidopsis thaliana GN=At3g61750 PE=3 SV=1
trembl
ID B9SBI1
description Dopamine beta-monooxygenase, putative OS=Ricinus communis GN=RCOM_0718420 PE=4 SV=1
Gene Ontology
ID GO:0016021
description cytochrome b561 and domon domain-containing protein at3g61750

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10410: 228293-230439
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001377_220 0.0 - - dopamine beta-monooxygenase, putative [Ricinus communis]
2 Hb_001935_060 0.0296516711 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
3 Hb_010166_010 0.0469992923 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14 [Jatropha curcas]
4 Hb_002311_010 0.0489906717 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
5 Hb_002662_070 0.0500474445 - - hypothetical protein JCGZ_16102 [Jatropha curcas]
6 Hb_005686_040 0.0512986034 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002078_180 0.0553333555 - - PREDICTED: 65-kDa microtubule-associated protein 8 [Jatropha curcas]
8 Hb_038927_020 0.0579670388 - - PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo]
9 Hb_000086_490 0.0612155575 - - cellulose synthase [Populus tomentosa]
10 Hb_000416_020 0.0637937705 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002835_360 0.0661615225 transcription factor TF Family: MYB hypothetical protein POPTR_0015s09430g [Populus trichocarpa]
12 Hb_001051_060 0.0669807177 - - UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis]
13 Hb_050514_030 0.0678777758 - - PREDICTED: protein trichome birefringence-like 34 [Jatropha curcas]
14 Hb_005523_030 0.0735191033 - - PREDICTED: probable galacturonosyltransferase 12 [Jatropha curcas]
15 Hb_000347_060 0.0739725481 - - PREDICTED: uncharacterized protein LOC105631356 [Jatropha curcas]
16 Hb_000776_090 0.0741049321 - - PREDICTED: COBRA-like protein 4 [Jatropha curcas]
17 Hb_000328_030 0.0744520997 - - PREDICTED: cellulose synthase A catalytic subunit 7 [UDP-forming] [Jatropha curcas]
18 Hb_002739_140 0.078576238 - - PREDICTED: protein TPX2 [Jatropha curcas]
19 Hb_015807_090 0.0796572859 - - PREDICTED: probable galacturonosyltransferase 12 [Jatropha curcas]
20 Hb_000165_260 0.0799266187 - - PREDICTED: uncharacterized protein LOC105133752 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_001377_220 Hb_001377_220 Hb_001935_060 Hb_001935_060 Hb_001377_220--Hb_001935_060 Hb_010166_010 Hb_010166_010 Hb_001377_220--Hb_010166_010 Hb_002311_010 Hb_002311_010 Hb_001377_220--Hb_002311_010 Hb_002662_070 Hb_002662_070 Hb_001377_220--Hb_002662_070 Hb_005686_040 Hb_005686_040 Hb_001377_220--Hb_005686_040 Hb_002078_180 Hb_002078_180 Hb_001377_220--Hb_002078_180 Hb_001935_060--Hb_010166_010 Hb_001935_060--Hb_002311_010 Hb_001935_060--Hb_002078_180 Hb_001935_060--Hb_005686_040 Hb_038927_020 Hb_038927_020 Hb_001935_060--Hb_038927_020 Hb_050514_030 Hb_050514_030 Hb_010166_010--Hb_050514_030 Hb_010166_010--Hb_002311_010 Hb_000416_020 Hb_000416_020 Hb_010166_010--Hb_000416_020 Hb_010166_010--Hb_005686_040 Hb_002311_010--Hb_038927_020 Hb_007281_010 Hb_007281_010 Hb_002311_010--Hb_007281_010 Hb_002311_010--Hb_000416_020 Hb_002662_070--Hb_005686_040 Hb_001051_060 Hb_001051_060 Hb_002662_070--Hb_001051_060 Hb_002662_070--Hb_001935_060 Hb_000347_060 Hb_000347_060 Hb_002662_070--Hb_000347_060 Hb_002835_360 Hb_002835_360 Hb_002662_070--Hb_002835_360 Hb_005686_040--Hb_001051_060 Hb_005686_040--Hb_002078_180 Hb_000086_490 Hb_000086_490 Hb_005686_040--Hb_000086_490 Hb_005686_040--Hb_002835_360 Hb_005523_030 Hb_005523_030 Hb_005686_040--Hb_005523_030 Hb_015807_090 Hb_015807_090 Hb_005686_040--Hb_015807_090 Hb_002078_180--Hb_002835_360 Hb_002078_180--Hb_015807_090 Hb_002078_180--Hb_000086_490 Hb_009476_080 Hb_009476_080 Hb_002078_180--Hb_009476_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0770267 3.82679 8.19977 89.1649 0.0749914 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0940897 68.669

CAGE analysis